Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00094 ATGCCAGCTAAACAAGTCATAGAGGAAATTTCTTCTGAGAATTCTGTATATTCACCAATGGTAACCAGATTCAGATTTGTGTTTGACAGATTATGGGCTTTTGCCTCTTCCTGGAAGACAAGCAGCACACCACGTGGTCGAAGAATTTTCCACAGAGACGTCGAAAAAGAAGAATTCCAGTATGCCAGTACTCAATGCCTCTCTTCCTACTACAGTGTCTTCGTCGTTCGCCTGGCAATCATGGTCATGTTGGCCATCCTGATTGGGCTGCTCACTATATTAACATGGCATTTCACAAAGAGATATACGGCAAAATCACTTGATAACTTAGCATATGGTCTTCGTTTTGAATTACTGCAACGCCCCATCTTACGAATGTGGAATATTTTGAATTCTACGGCTGAAATTACAAGAACTCAGGTTGAGCTGTCTCAATATGTAATCAGACGATACAGCAAGCCTGCCAATCAAGCAGAACAAGTTGAGCAGCTGTACGAGGCTATGAAGTCTGTTACCTGGGCCCTCTTCTCTAGCCGCAGGGCACTCAATTCAATAACTATCAATTACAGGAACGGCTTTGTTCAGGCATTCCACAGAGATCTTAAGGATAACAACACATTTTACATCTACTCTGATCTTGCAAACTACTCCATAGGTGCCAGTGTTGCCAATGAAATGAAATCACTCTCAACACATCAAGCTTGGAACGATGAAGCCATTCGTGGTAACCGTTCTGCAACTTGGTACCGTGAACCACTTGACCCTCTTAGTGGTGAGAAGATTGGAAAAGCTAAGAAGATTGCACCAGAAGACTTGATTAATATTGCTGGCATTTCTCAAGTCCCTGACGGGGCAGCTTCATGGCATGTTGCTGTGAGCAAGTTCACAGATTCACCTTTGCTTTCTGCTGCGCTGCCAGTTTGGGACTCTTCTAATAAGAGCATTGTGGCAGTTGTGGGGGTCACAACTGCACTTTATAGTGTTGGCCAGCTAATGAAAGAACTAGTTGAATTTCATAGCGGTTATATCTATTTAACCTCCCTAGAGGGTTACTTACTTGCCACTTCCACAAATGCTTCACTGCTAACATATTCAAAGCCTCTCAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTCATACGATTGGGAGCCCAGTGGCTGAAGAGAACCTATGGGAAGGATTTCCCTCCAAGTCATGGGGTTCATGTAGAGAATGTCAAGCTAGGCAACCAGCAATATTACATCGACTCATTCTTTTTAAATTTGAAGAGGCTTCCTCTGGTGGGTGTGATCATTATCCCAAGAAAGTATATTATGGGGAAGGTTGATCAAAGAGCCTTCAAAACGTTGGTTATTCTGATATCTGCATCGTTGTGTATTCTAGTCATTGGATGTGTTTGCATATTAATTCTGACAAATGGGGTGTCAAAGGAAATGAGACTAAGAGCAGAACTGATCAGTCATCTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAGTTTCTTGCAAACATGAGTCATGAATTGAGGACACCAATGGCAGCAGTGATTGGGTTGCTTGACATTCTTATATCTGATGATTGTCTAACAAATGAACAATATGCAACAGTTACTCAGATAAGAAAATGTTCAACTGCATTACTCCGTCTTCTTAACAACATTTTGGATCTCAGCAAGGTGGAATCCGGAAAGTTGGTGTTAGAAAATGCGGAATTTGACTTGGGACGGGAACTTGAAGGCCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAACGTAGAGACTGTTTTGGACCTATCAGATGATATACCAAAGGTCGTTCAGGGTGATTCTGCTAGGGTTGTTCAAATTTTTGCAAATTTGATCAACAATTCAATTAAGTTCACTCCATCTGGTCATATTATTCTTCGAGGATGGTGCGAAAACCCAAATTGTTCCAGTGATAGTCGAAATCTTCCTCTTAATCAGAAGTCCCGAACTCCACAAAAAACCAGAATGAGGCAACAAGAAAACCATGCAAAGAAGGCATCTAAAAAAGACAACCAAATAATTCTTTGGTTTGAAGTAGATGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCATCAACCACTAGATTGCACGGAGGCACCGGTCTTGGACTTTGCATTGTGAGAACCTTGGTCAATAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAAGGCCCAGGAACCCTGATGCGACTGTACCTGCTTCTCAGTACACCCATGGATGCCACAGAACAACATTGTCAAATAGATTATGCGGAGAATGGCTTAGTGGTATTGCTTGCACTACATGGAGACACGGGTCGATCTATCACATCTAAGTGGTTACAGAAAAATGGGGTTTGCACTCTAGAGGCATCTGAATGGAATGAACTGACGCAAATTCTGAGGGAACTCTTCCATGCAAGTTCAGTCCACCATAATGGCTTTGATGCACATTATGCAGTAAATAAGAGTTGGAAGTCCATATTACTCAACATAGAAGAAATGAGGAACCCAACATTTGTCATTATAGTGGACATAGGGCTACTTGATTTGAGCACAGGTATATGGAAGGAACAGCTCATCTTCCTTCACAAGTACTTTGGTAGAGCAAAGTTCGCATGGGTGCTAAATCATGACACCTCTAATACCATAAAGATGGAGCTTCGCAGGAAGGGGCATATATTGATGGTCAACAAGCCCCTCTACAAAACCAAAATGTTTCATATTCTAGAAGCTGTTATAAAGGAGAGAAATTTTGAGCTGCAAAAGACAAATACGACTGCTTCAAGAACCTCAACGAAAGAGGGTGACGCACACGAGTTTCTGGAGATTGATTCTACTCATCTTGATGGTGTTAGCTCTGATGGTTCTGACATATCCGAAATGGGTGCTTCTAATAGTTCCAATGGAGAAAAACGAAGGGAAACAATAGTGAAATCCCATCCACCATCACAGTACAACAAAAACAACTGCTTCGTTGGATTAACCGATGACTATGCAGAAGATAGCATTTCAAGGAAAGAAGAATCCTGGAAGAGTAGCCCCAACTGCCGTGACATCCATGAAGACACGGAACCAAAATCACAAGCATCATCTCCAACAGAAGCTCAAGAAAGGGAATCTGGTTGTGGGAAAACATTAAGTGTCAATTGCTCAAGTAAGACTGTCAATGGAAAGAAATCTCTTGAAGGTCTGAGGATATTGCTTGCAGAGGACACTCCAGTACTTCAGAGAGTTGCAACCATCATGTTGGAAAAAATGGGAGCTATAGTTGTTGCAGTAGGTGATGGACAGCAGGCTGTGGATGCTCTGAATTGCATGCTTGGCGCTGAAGATAGTACAGGGGAGTCTCTAATGAAGGAGAGAAGCACAATATCTCAAACAGAAATTATCAGTTGTACACCTTATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCGACGAAAGCAATCAGGAAGTCGGAAGCAGGAACTGGCTCGCACATTCCCATTGTTGCTCTTACAGCCCATGCAATGTCATGTGATGAGGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATCTAACAAAGCCAATTGACTTCAAGCTGATGGTGTCAACCATTCTTTCACTCACTAAAACAACTTCCTGA 3714 0.4225 MPAKQVIEEISSENSVYSPMVTRFRFVFDRLWAFASSWKTSSTPRGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKRYTAKSLDNLAYGLRFELLQRPILRMWNILNSTAEITRTQVELSQYVIRRYSKPANQAEQVEQLYEAMKSVTWALFSSRRALNSITINYRNGFVQAFHRDLKDNNTFYIYSDLANYSIGASVANEMKSLSTHQAWNDEAIRGNRSATWYREPLDPLSGEKIGKAKKIAPEDLINIAGISQVPDGAASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSLEGYLLATSTNASLLTYSKPLKLKMAVDCEDDVIRLGAQWLKRTYGKDFPPSHGVHVENVKLGNQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRAFKTLVILISASLCILVIGCVCILILTNGVSKEMRLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLENAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDIPKVVQGDSARVVQIFANLINNSIKFTPSGHIILRGWCENPNCSSDSRNLPLNQKSRTPQKTRMRQQENHAKKASKKDNQIILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLYLLLSTPMDATEQHCQIDYAENGLVVLLALHGDTGRSITSKWLQKNGVCTLEASEWNELTQILRELFHASSVHHNGFDAHYAVNKSWKSILLNIEEMRNPTFVIIVDIGLLDLSTGIWKEQLIFLHKYFGRAKFAWVLNHDTSNTIKMELRRKGHILMVNKPLYKTKMFHILEAVIKERNFELQKTNTTASRTSTKEGDAHEFLEIDSTHLDGVSSDGSDISEMGASNSSNGEKRRETIVKSHPPSQYNKNNCFVGLTDDYAEDSISRKEESWKSSPNCRDIHEDTEPKSQASSPTEAQERESGCGKTLSVNCSSKTVNGKKSLEGLRILLAEDTPVLQRVATIMLEKMGAIVVAVGDGQQAVDALNCMLGAEDSTGESLMKERSTISQTEIISCTPYDLILMDCQMPKMDGYEATKAIRKSEAGTGSHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTKTTS 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00094 1237 MobiDBLite consensus disorder prediction 669 683 - -
Accr9g00094 1237 MobiDBLite consensus disorder prediction 1051 1067 - -
Accr9g00094 1237 SUPERFAMILY CheY-like 1085 1233 IPR011006 -
Accr9g00094 1237 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 489 569 IPR036097 GO:0000155|GO:0007165
Accr9g00094 1237 Gene3D - 1070 1235 - -
Accr9g00094 1237 SMART HKATPase_4 615 766 IPR003594 -
Accr9g00094 1237 SMART REC_2 1087 1229 IPR001789 GO:0000160
Accr9g00094 1237 PRINTS Bacterial sensor protein C-terminal signature 691 705 IPR004358 GO:0016310|GO:0016772
Accr9g00094 1237 PRINTS Bacterial sensor protein C-terminal signature 709 719 IPR004358 GO:0016310|GO:0016772
Accr9g00094 1237 PRINTS Bacterial sensor protein C-terminal signature 726 744 IPR004358 GO:0016310|GO:0016772
Accr9g00094 1237 MobiDBLite consensus disorder prediction 1028 1067 - -
Accr9g00094 1237 MobiDBLite consensus disorder prediction 970 1013 - -
Accr9g00094 1237 Pfam Response regulator receiver domain 1089 1228 IPR001789 GO:0000160
Accr9g00094 1237 ProSiteProfiles Histidine kinase domain profile. 509 766 IPR005467 -
Accr9g00094 1237 SMART HisKA_10 502 568 IPR003661 GO:0000155|GO:0007165
Accr9g00094 1237 PANTHER TWO-COMPONENT HISTIDINE KINASE 59 774 - -
Accr9g00094 1237 ProSiteProfiles Response regulatory domain profile. 1088 1233 IPR001789 GO:0000160
Accr9g00094 1237 CDD HisKA 503 564 IPR003661 GO:0000155|GO:0007165
Accr9g00094 1237 MobiDBLite consensus disorder prediction 656 683 - -
Accr9g00094 1237 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 557 762 IPR036890 -
Accr9g00094 1237 MobiDBLite consensus disorder prediction 972 993 - -
Accr9g00094 1237 Gene3D - 570 767 IPR036890 -
Accr9g00094 1237 Gene3D - 490 569 - -
Accr9g00094 1237 Pfam His Kinase A (phospho-acceptor) domain 503 568 IPR003661 GO:0000155|GO:0007165
Accr9g00094 1237 FunFam Histidine kinase 1-like protein 490 569 - -
Accr9g00094 1237 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 615 764 IPR003594 -
Accr9g00094 1237 CDD REC_hyHK_CKI1_RcsC-like 1089 1229 - -
Accr9g00094 1237 MobiDBLite consensus disorder prediction 1028 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00094 Accr-Chr9 1061248 1067643 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00094 10 1237 Histidine Kinase Gene Family AT2G17820 64.428 0.0 1564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr9g00094 HATPase_c 3.8e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00094 - - gmx:100814068 1894.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00094 9 1061248 1067643 Accr9g00094 9 1061248 1067643 ECH