Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00072 ATGGATGATCGGCACCGCAATTTATTGGCTGCTCCACCGCCGGAAATGAAAAAGCCACCCAATTCCAAAAGCAGTTACTACCAAACTATGTTGATAGGGTCTGTTTGTGGCATTTTATTTTTGACAGTAATGATAGTTGCATTGTTGTACTGCTTCATCAAGAGAAAGGGTCATATACTTAAATGCAGGAGGAGTTCGAAAGGTGCAGAAGATGAAAAGAGTTTGAAATATGATAAAATATCGTTGAGGCGTTTTGGTTTGGAGGAACTAAAGAAGGCTACAAATAATTTTAGCCCAGATTGCTTGCTAGGTTCTGGTGCATTTGGAACGGTGTATAAAGGAACCTTTGAATTAGAAGGAACATTAGCCATTAAAAGAGCTCATGGTGAATCCTTCTTAAGCAAGGCAGAGTTCATAAATGAAGTGAAGCTCATTTCGAAAGTAAAGCACAGGAATCTTGTTAGTCTGGTGGGATATTGTGAAGAGCCTGGAGGTGGGGTTCAAATGCTGGTTTATGAATATGTGCCTAATGGTTCTCTGCTCGAGTACATGATGGGAAAAAGAGGGAAGAGCTTAACTTGGAGGCAAAGAGTAAACATAGCAATAGGAGCAGCTAAAGGTATAGCTTACTTGCATGAAGAGGTGAAACCAAGTTTAATTCATCGTGACATCAAACCAAGCAACATCTTAATAGGGGAAAGATTTGAGGCTAAAGTTTCAGATTTTGGGTTGATAAAATCAGGACCAACTGGTGATCAATCTCATGTTAGCAGCCAGATCAAAGGAACCCCAGGATACCTTGACCCCACTTATTGTTCAACCTTTCATTTGACTACTTTCAGTGACGTTTATAGTTTTGGTGTCATACTCCTCCAACTTATTTCTACTAGACCAGCCGTTGATCCCAAAAAAAATAAAAATAATTCTCATATTATTGATTGGGCAAGACCTAGCATAGAGAAGGGTAGTATTGAAGAAATCATAGATGCCAATTTACTATGTGAGCCTTGCAATATGAAGGTTATGTTGAAGATGGGTCAGCTTGCCCTTAGATGTGGGGCTCAAGTACCAAAGCATCGTCCTACAATGGCACAAGTGTGTCAGGAGTTAGAAGAGTCTCTCCAGATAGCTGATAACTTGATTTGCAAACTACCTTCAAAGAATTTCAGTAAATCAAGTAAAACATTTCAAGAATTAACAGAATCAGAGGCTCTCAAATCCATAGAAAATTATGATTGTTCAGAGAGTTTTATAAGTATAAATGGTGTTGGATTTCAAAAGTTTCTTATCGATATGGATCGTTTATCCTTTCGAAGTGAAAATTTAAGATGCCTAGAAAATAATAGCATTAGTATTGACACAGATGTCAACACTTTGAGGAGAATACAAGAAGACGAAGCTATGGAAAAGTAG 1413 0.3822 MDDRHRNLLAAPPPEMKKPPNSKSSYYQTMLIGSVCGILFLTVMIVALLYCFIKRKGHILKCRRSSKGAEDEKSLKYDKISLRRFGLEELKKATNNFSPDCLLGSGAFGTVYKGTFELEGTLAIKRAHGESFLSKAEFINEVKLISKVKHRNLVSLVGYCEEPGGGVQMLVYEYVPNGSLLEYMMGKRGKSLTWRQRVNIAIGAAKGIAYLHEEVKPSLIHRDIKPSNILIGERFEAKVSDFGLIKSGPTGDQSHVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLISTRPAVDPKKNKNNSHIIDWARPSIEKGSIEEIIDANLLCEPCNMKVMLKMGQLALRCGAQVPKHRPTMAQVCQELEESLQIADNLICKLPSKNFSKSSKTFQELTESEALKSIENYDCSESFISINGVGFQKFLIDMDRLSFRSENLRCLENNSISIDTDVNTLRRIQEDEAMEK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00072 470 Gene3D Phosphorylase Kinase; domain 1 67 174 - -
Accr9g00072 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Accr9g00072 470 ProSiteProfiles Protein kinase domain profile. 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00072 470 CDD STKc_IRAK 103 372 - -
Accr9g00072 470 MobiDBLite consensus disorder prediction 1 21 - -
Accr9g00072 470 PANTHER OS01G0750732 PROTEIN 64 393 - -
Accr9g00072 470 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Accr9g00072 470 SUPERFAMILY Protein kinase-like (PK-like) 78 370 IPR011009 -
Accr9g00072 470 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 175 378 - -
Accr9g00072 470 SMART serkin_6 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00072 470 Gene3D Transferase(Phosphotransferase) domain 1 175 386 - -
Accr9g00072 470 FunFam Putative LRR receptor-like serine/threonine-protein kinase 65 174 - -
Accr9g00072 470 Pfam Protein tyrosine and serine/threonine kinase 102 370 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00072 Accr-Chr9 871340 873389 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00072 83 416 Receptor kinase-like Gene Family AT1G30570 41.791 1.27e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Accr9g00072 PK_Tyr_Ser-Thr 7.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00072 - - qsa:O6P43_033569 608.216