Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00060 ATGGGGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTCCAGTCACCGCAAGCTCATCCTCGCCACCACAGGAAGAAATTGGAGGTCTACAATGAGGTGCTACGTCGAATTCAAGAGTCCAATTGTGAGGATGCCAATGTTCCAGGGTTTGATGATCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTAATCATAAGAGATTGCTGAAGTTGGCAGAGGACCCTGCTAATCGACCTGTATTTCAAGTTCGTTCAGTCCAGGTATATCCTTACGGATGTGCTAATTTTGCTGACTCAGCGCATTCTGATCCTTCTGAGAAAGAAGATGCGCAGAGTTCTTTTAACTATTCTTTTAAGCAGGGAGTTCATCCACCACCTACTTTTGGTTTATCTTCTAATCTCGAAGTTCTTTCCCGCCAAGCATGTAAAAATGATGCTGAAGACGGGGATGGGGATATGGATTCGACACCATGCTTTTACAGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAAGTCCTCAGTCAGTTAACTTCATTACTTGGGGAGATGGGACTTAACATTCAAGAAGCTCATGCATTTTCCACTACAGATGGGTTTTCTCTTGATGTCTTTGTTGTTGAAGGGTGGCCAAATGAGGAGACCGAGGAGCTTAAATGTGTATTGGAAAAGGAAATTTTGAAGTTTAAGCGGGATCAACATTTATCAAAACAGGGCATGCCTTCTGCTGCCATTGAACATTATTGTCAGGCAAGGATGGAACCCTTCCCTCATTGTGTAGAAATACCATCTGATGGAACCGATGTCTGGGAAATTGATGCCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTTGGTGATTTGTACAGAGGTACTTATTGCAGTCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTTCAGTTCATTGGAGCATGCACTCAGCCGCCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAACAAAGGGGTGTGTTTAAGCTTCCTTCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATCCACAGGGACCTCAAGACTGCCAATCTTCTTATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACGTACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTGCCTTATGCTTACCTGACCCCATTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGTCTACGACCTTCAATCCCCAAGAATGCACACCCTAGGCTTTCGGAGCTGCTCCTGCGATGTTGGCAACAAGATCCAATTGAGAGGCCGAATTTCTCAGAAATATTGGTAATTCTTCAGCAGATAGCAAAGGAGGTTGCTGACGATAGACCCAAAGATAAATCATCCCAGGGCTTTCTCTCGGCACTAAGACGGGGCCATCAGTAA 1731 0.4396 MGIEEDLESCGSRACVQSPQAHPRHHRKKLEVYNEVLRRIQESNCEDANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLNHKRLLKLAEDPANRPVFQVRSVQVYPYGCANFADSAHSDPSEKEDAQSSFNYSFKQGVHPPPTFGLSSNLEVLSRQACKNDAEDGDGDMDSTPCFYRPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKCVLEKEILKFKRDQHLSKQGMPSAAIEHYCQARMEPFPHCVEIPSDGTDVWEIDANQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLTPLQAAVGVVQKGLRPSIPKNAHPRLSELLLRCWQQDPIERPNFSEILVILQQIAKEVADDRPKDKSSQGFLSALRRGHQ 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00060 576 CDD ACT_TyrKc 181 248 - -
Accr9g00060 576 Gene3D Transferase(Phosphotransferase) domain 1 377 570 - -
Accr9g00060 576 ProSiteProfiles ACT domain profile. 183 263 IPR002912 -
Accr9g00060 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 555 - -
Accr9g00060 576 FunFam serine/threonine-protein kinase HT1 377 568 - -
Accr9g00060 576 Pfam Protein tyrosine and serine/threonine kinase 298 545 IPR001245 GO:0004672|GO:0006468
Accr9g00060 576 ProSiteProfiles Protein kinase domain profile. 298 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00060 576 FunFam Serine/threonine-protein kinase isoform 1 288 376 - -
Accr9g00060 576 PRINTS Tyrosine kinase catalytic domain signature 518 540 IPR001245 GO:0004672|GO:0006468
Accr9g00060 576 PRINTS Tyrosine kinase catalytic domain signature 409 427 IPR001245 GO:0004672|GO:0006468
Accr9g00060 576 PRINTS Tyrosine kinase catalytic domain signature 474 496 IPR001245 GO:0004672|GO:0006468
Accr9g00060 576 PRINTS Tyrosine kinase catalytic domain signature 455 465 IPR001245 GO:0004672|GO:0006468
Accr9g00060 576 PRINTS Tyrosine kinase catalytic domain signature 372 385 IPR001245 GO:0004672|GO:0006468
Accr9g00060 576 SMART serkin_6 298 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00060 576 Gene3D Phosphorylase Kinase; domain 1 287 376 - -
Accr9g00060 576 SUPERFAMILY ACT-like 181 245 IPR045865 -
Accr9g00060 576 ProSitePatterns Protein kinases ATP-binding region signature. 304 325 IPR017441 GO:0005524
Accr9g00060 576 SUPERFAMILY Protein kinase-like (PK-like) 277 545 IPR011009 -
Accr9g00060 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Accr9g00060 576 CDD STKc_MAP3K-like 304 547 - -
Accr9g00060 576 MobiDBLite consensus disorder prediction 557 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00060 Accr-Chr9 742317 751488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00060 4 576 MAP Kinase Kinase Kinase AT4G35780 71.304 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Accr9g00060 PK_Tyr_Ser-Thr 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00060 - - gmx:100816767 976.852