Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00044 ATGGGTCTATGCTTTGGGTCTCCCGCCCACGATGACGGAGCGGGGTCTAGTATCAACAGAAATCCATATTCTGGTTCAGCGAGTACTGACAGTAAGAACGTTGGGTTCTCTACTACGAACAGCAGTGCCACAAAGAGTCAATTTTCAGAACTAGCAAGTGGGAACCTCGGGGATTCCCTTCCTGCTCCCAGTGGGCAAATTCTAGAAACTCCAAACCTGAAGGTATTTAGTTTTGTAGACTTGAAAGCAGCCACGAAGAACTTCAAACACGATACATTGCTTGGTGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGCTGGATGAGAAGACACTGACACCATCTAAGGCGGGGTCTGGAATTGTGGTTGCTATTAAAAAATTGAACCCAGAAAGTGTGCAAGGATTCCAAGAGTGGCAGTCAGAAGTCAATTTCTTAGGAAGGCTTTCCCATCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGATGCTGAGGAGCTGCTGCTTGTGTATGAGTTCATGCCAAAGGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCACTTTATTGGAACATGCGACTCAAAATAGCTATTGGTGCAGCTCGAGGCCTGGCCTTTTTGCACACTTCAGAAAAGAAAGTGATATACCGAGATTTCAAGGCCTCAAATATACTACTTGATGGGAATTATAATGCTAAAATTTCTGACTTTGGCTTGGCCAAATTGGGGCCATCAGGCGGAGAATCACATGTTACAACTAGGGTTATGGGCACTTATGGCTATGCTGCTCCAGAATATGTTGCTACAGGGCACTTGTATGTGAAGAGTGATGTGTATGGATTTGGCGTAGTGCTGCTTGAAATGCTGACAGGTTTGCGGGCACTTGATACGAAGCGACCAAGTGGGCAGCAGAATCTGGTTGACTGGGTGAAGCCGTATCTGTCGAGTAAGAGAAAGTTGAAAACAGTTATGGACGCTAGGATTCAGGGTCAATATACACTCAAGGCAGCATCACAGGCTGCTAAGCTTGCTCTCAAATGCTTACAACCCGATCCTAAGCACCGTCCTTCCATGAAAGAAGTAGTTGAGGAATTGGAAGGCATTGAAGAATCAAAGACTTAG 1137 0.4512 MGLCFGSPAHDDGAGSSINRNPYSGSASTDSKNVGFSTTNSSATKSQFSELASGNLGDSLPAPSGQILETPNLKVFSFVDLKAATKNFKHDTLLGEGGFGKVYKGWLDEKTLTPSKAGSGIVVAIKKLNPESVQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDAEELLLVYEFMPKGSLENHLFRRNPNIEPLYWNMRLKIAIGAARGLAFLHTSEKKVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGESHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPSGQQNLVDWVKPYLSSKRKLKTVMDARIQGQYTLKAASQAAKLALKCLQPDPKHRPSMKEVVEELEGIEESKT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00044 378 CDD STKc_IRAK 94 373 - -
Accr9g00044 378 Gene3D Transferase(Phosphotransferase) domain 1 174 378 - -
Accr9g00044 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Accr9g00044 378 FunFam Serine/threonine-protein kinase BIK1 58 173 - -
Accr9g00044 378 SUPERFAMILY Protein kinase-like (PK-like) 64 371 IPR011009 -
Accr9g00044 378 MobiDBLite consensus disorder prediction 1 41 - -
Accr9g00044 378 ProSiteProfiles Protein kinase domain profile. 88 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00044 378 FunFam Serine/threonine-protein kinase PBS1 174 378 - -
Accr9g00044 378 ProSitePatterns Protein kinases ATP-binding region signature. 94 127 IPR017441 GO:0005524
Accr9g00044 378 Gene3D Phosphorylase Kinase; domain 1 61 173 - -
Accr9g00044 378 Pfam Protein tyrosine and serine/threonine kinase 91 370 IPR001245 GO:0004672|GO:0006468
Accr9g00044 378 PANTHER OS01G0588500 PROTEIN-RELATED 42 374 - -
Accr9g00044 378 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00044 Accr-Chr9 471439 476252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00044 74 370 Glycoside Hydrolase AT3G07070 52.013 6.71e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr9g00044 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00044 - - qsa:O6P43_033520 599.742