Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00043 ATGGATTCCGCAGAGACCGGTTTGCTGACCACTCTTCTAGTCTTCCAGAACACCATTGAAGAAGAGCTGATCAGGAGCGTGCATGTCTACCGACTGAGGGATGGGAGGGAAAGCGAGGTTGAAAGAGAGTTTGTATTTTCTCGGAGTGGCTCATACGGAGAAATGCGGGCTACCCCAATTCTTAGATTACAGAAATTTCGTGTTCCCGAAGTTCCTGAAGGGTATCAGAATGGAGTCTGGCTTTGTGTCTTTGCGTTTCACGCCGATCACAAGCCTCAGTGTTCCCGCGTTCCTCGGTTGTTATCAGTCACGAGGAATCCCAAGCTTCAGATGATCCCAACATTGCTTAGTGATCTCTGTATGATAAATGAGCTGAACTGTAAATCAAAAGAGAATGATATGCTGCAAATCTCTCCTGATGATAGATGCCAAGGAAACAGCAATGATAGCCATCAGCAAAGAAAAATTTTGCTCCTGGATCTCAATTGTCTTCCTTATCCAGATGACATGCCTGAGTTAGAAGACAAGGAAGTAGATGAAGAAAGTTTAGGCATGTCAGAGTTACCAGAAGAATCAGATGGTGAAAGTTTAGGCACAGCTGAGTTACCAGAAAATGACATCATTGACGAAAGTTTTCCAGGTAACATAGAGAAGAAAAAGAGAGCAGCCAGTAAAGATGTAGCAAGCATTAGTTTAGCAGATCTGGTGAAATACTTTGATGTGCCAATTGTAGAAGCATCAAGAAATCTAAAAGTTGGACTTACTGTACTGAAGAGGAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATTAAATCCCTTGACAATCTCATTCATGATCTTCAGGAAGTGGCAGAAAATGAAGAAATGGAGAATGATGCTTCTGTTACGGCTGTGACCAAGAGGCAAAAGATGCTCGAGTGTGAAAAAGAAATAATTGAGAGGAAACCCTCCCTGGACATACAAAGAGAAACCAAGAGATTCAGGCAGGATGTCTTCAAGAGAAGGCACAGGGCTAGAGCTATGACAAAACAGAGCTCCAGTGCCTGCAGCTCTTAG 1068 0.4354 MDSAETGLLTTLLVFQNTIEEELIRSVHVYRLRDGRESEVEREFVFSRSGSYGEMRATPILRLQKFRVPEVPEGYQNGVWLCVFAFHADHKPQCSRVPRLLSVTRNPKLQMIPTLLSDLCMINELNCKSKENDMLQISPDDRCQGNSNDSHQQRKILLLDLNCLPYPDDMPELEDKEVDEESLGMSELPEESDGESLGTAELPENDIIDESFPGNIEKKKRAASKDVASISLADLVKYFDVPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEVAENEEMENDASVTAVTKRQKMLECEKEIIERKPSLDIQRETKRFRQDVFKRRHRARAMTKQSSSACSS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00043 355 PANTHER PROTEIN RKD4 175 350 IPR044607 GO:0003700
Accr9g00043 355 Coils Coil 274 294 - -
Accr9g00043 355 ProSiteProfiles RWP-RK domain profile. 212 297 IPR003035 -
Accr9g00043 355 MobiDBLite consensus disorder prediction 170 199 - -
Accr9g00043 355 MobiDBLite consensus disorder prediction 172 188 - -
Accr9g00043 355 Pfam RWP-RK domain 230 277 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00043 Accr-Chr9 464315 469163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00043 19 355 AtRKD Transcription Factor Family AT4G35590 46.746 5.49e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Accr9g00043 RWP-RK 1.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00043 - - pcin:129284388 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00043 9 464315 469163 Accr9g00043 9 464315 469163 ECH