Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00033 ATGTCCTGCTCCTCCTCGTCAGGGTCGGAGGAGGATGATGAGGGCTTCGAATCCTACAGGAAAGGAGGCTATCATGCCGTCCGGGTCGGCGATCAGTTCGCCGGCGGCAGGTACATAGCACAGAGGAAACTCGGGTGGGGTCAGTTCTCCACTGTGTGGCTTGCTTACGATACTCGCACCTCTACATACGTTGCTCTTAAGATCCAGAAGAGTGCAGCCCAGTTTGCTCAGGCTGCCCTTCATGAGATTAGTGTTCTTTCATCTATTGCTGATGCTGACCCTTCAAATTCAAAGTGTGTTGTCCACTTGATCGATCACTTTAAGCATACAGGTCCAAATGGACAGCACCTTTGTATGGTCCTTGAGTTTCTTGGTGATAGTTTGCTTCGTCTGGTCAGACATACCCGTTACAAAGGCCTTCCATTAAATAAAGTTAGGGAGATATGCAAATGTATTTTGATTGGTCTGGATTACTTGCACAGAGAACTTGGTATAATCCACACTGATCTGAAACCTGAAAATATTCTTCTCTTTTCTTCTATTGACGCTTCTAAAGACCCTGTCAGATCTGGACTTTCCCCAATCCTAGAGAGGCCAGAAGGAAACCCAACTAGTGGAGTTACAAGTCTTATTGAAAAAAGGTTAAAAAGGAGGGCAAGGAGGGCTGTTGCTAAGATATCTGAAAAGCGTGATTCAATGGGAGGAGCAGGAGAAGCTCAGAAGTCTGAAAGAAATGTTGAAGGGATTGATGTGAGATGCAAGATTGTAGACTTTGGAAATGCATGTTGGACTGATAAGCGAATTGCTGAAGAAATCCAGACAAGACATTACAGAGCACCTGAAGTAATATTGCAGGCTGGTTACTCCTTCTCTGTTGACATGTGGTCTTTTGCTTGCACTGCTTTTGAACTTGCCACTGGTGATATGATGTTTACCCCAAAAGGCGGACAAGAATTTAGTGAAGATGAGGATCACCTAGCCATGATGATGGAACTTCTTGGAAAAATGCCCCGCAGGGTTGCCATCTGTGGAGCACGATCCAAGGATTACTTTGACAGGCATGGGGATCTAAAACGGATCCGGAGGCTAAAATTCTGGCCGCTTGATAAATTGTTGATTGATCGATACAAATTTTCAGGGAATGATGCGAGGGAGTTGTCAGACTTTCTCCTGCCGCTTCTTGATTTTGCTCCAGAAAACCGGCCAACAGCCCAGCAGTGCCTGCAACACCCTTGGATTAGTGGTAAGGATTCAACTCCACGTGAAAAGAGAAATGAGGCTAGTGTGGAAAAGGGTCATGTTGGGATGAGCAACCTGCGTATCAAGGTGGGAAAGTGA 1338 0.4581 MSCSSSSGSEEDDEGFESYRKGGYHAVRVGDQFAGGRYIAQRKLGWGQFSTVWLAYDTRTSTYVALKIQKSAAQFAQAALHEISVLSSIADADPSNSKCVVHLIDHFKHTGPNGQHLCMVLEFLGDSLLRLVRHTRYKGLPLNKVREICKCILIGLDYLHRELGIIHTDLKPENILLFSSIDASKDPVRSGLSPILERPEGNPTSGVTSLIEKRLKRRARRAVAKISEKRDSMGGAGEAQKSERNVEGIDVRCKIVDFGNACWTDKRIAEEIQTRHYRAPEVILQAGYSFSVDMWSFACTAFELATGDMMFTPKGGQEFSEDEDHLAMMMELLGKMPRRVAICGARSKDYFDRHGDLKRIRRLKFWPLDKLLIDRYKFSGNDARELSDFLLPLLDFAPENRPTAQQCLQHPWISGKDSTPREKRNEASVEKGHVGMSNLRIKVGK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00033 445 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Accr9g00033 445 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 8 221 - -
Accr9g00033 445 CDD STKc_SRPK 27 413 - -
Accr9g00033 445 FunFam Serine/threonine-protein kinase SRPK 117 413 - -
Accr9g00033 445 MobiDBLite consensus disorder prediction 412 431 - -
Accr9g00033 445 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00033 445 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00033 445 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00033 445 MobiDBLite consensus disorder prediction 416 430 - -
Accr9g00033 445 FunFam Protein kinase superfamily protein 24 123 - -
Accr9g00033 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Accr9g00033 445 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Accr9g00033 445 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Accr9g00033 445 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g00033 445 SUPERFAMILY Protein kinase-like (PK-like) 32 420 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00033 Accr-Chr9 386534 390090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00033 4 414 EF-hand Containing Proteins AT5G22840 49.353 8.88e-165 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Accr9g00033 Pkinase 2.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00033 K08832 - qsa:O6P43_033508 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g00033 9 386534 390090 Accr10g01698 10 41049887 41053193 CCT
Accr9g00033 9 386534 390090 Accr9g00033 9 386534 390090 ECH