Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g00027 ATGGCGGGAGTTTGGTCTGTGGTGCTGATGATTCTCTTCCATAGATTCTCTTTGACTGAGGCTGCCTCGAATCATTCCACAAGACCCGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAACACCACCGTCGGTCATATTGTAAAGACTGCAATAGAAGCTGCAATTGAAGATGTAAATTCTGATCCATCTATTCTTGGTGAAACTAAGCTCAAAGTCTCAATGCAAGAAGATTCCAAATACAGAGGCTTTCTGAGTATTGCTGAGGCCCTGCATCTCACTGCAAAACGCACGGTGGCTATAATTGGCCCGCAAACCTCCGTGACAGCTCATGTGATATCTCATATTGCAAACGAGCTCCAAGTTCCTCTGCTATCAGTTTCAGCGACGGACCCCTCACTCTCTTCCCTTCAATTCCCATTCTTTGTCAGAACTGCGCATAGTGATCTTTATCAGATGACTGCCATTGCAGAGCTTGTTGACCACTACGGCTGGAGAGAGGTGATTGCAATCTATGTAGACGATGATCATGGAAGAAATGGGATCAGTGTCTTAGGAGATAAGCTTGCTGAGAGACGGTGCAGGATCTCTTTTAAAGCTCCTATGAGCCCTGAAGCAACCAGGGAGGAGATTACGAATGTGCTTGTTCAGGTGGCTTTGGCGGAGTCTAGGGTAATAGTTCTACACGCCAATGCTGCCTGGGGACCCAAGGTGTTTAGAATAGCAAAGTATCTGGAGATGATGGGATCTGGGTATGTTTGGATAGCCTCTCATTTTCTCTCTACTCTTCTGGATACAAATGGTCCACTCCCTCATGAAACAATGGAGATGATTCAAGGGGTTCTTACTCTGCGCATCCACACACCTGATTCAGAGCTCAAACGAAGATTTGTTTCCAGGTGGAAAAACGTGACTCGCCTCGGACTGAGTAGTTATTCTCTCTATGCATATGATACTGTTTATGTGCTTGCTCGTGCGCTCGATAGTTTCTTCAAACAAGGGAATCGAATAACATTCTCGTATGATCCCAAATTGTCAGAGCTGCTTGACAACAACTTGAATCTTGATTCTCTGAGCATCTTTGATGAAGGGAAGGTGTTGAGAGAAAGTATCTACGAGGTTGATATGGCAGGGGTAACTGGTACTTTCAAGTATGCATCCGACGGAAACCTTGTGAATCCGGCATATGAAATCCTCAATGTGATTGGGACAGGAAGTAGGAGAATTGGTTATTGGAGTAACTACACGGGATTATCAGTTGTTGCTCCAGAAGCACTCTATGCAAACCCGCCCAATCGTTCAGCGGCGAGTCAGAAGCTACGGCCAGTGATTTGGCCAGGGGACCCAGCGCAGAAACCTCGTGGTTGGGTTTTTCCGAGCAGTGGGAGGCTCTTAAAAATTGGAGTGCCCGTAGGTTTTAGTTACCGTCAATTTGTGTCACATGTACAGGGCACTGACATGTTCAAAGGCTTCTGCATTGAGGTGTTTCTTTCTGCACTCAACTTGCTGCCTTATGGCGTGCCTTATAGGTTTGTTCCATTTGGGGATGGTCACAACAATCCTAATAGCTACGAGCTTGTCCGTTTGGTGGCGGCGGGCGAATTTGATGGAGCGGTTGGTGACATTACAATTACTACGCAGCGAACAAGGATGGTAGATTTCACTCAGCCGTTTATTGGGTCTGGTTTGGTGGTTGTGGCCCCGGTTAGGAAGTCGGACTCCAGTGCTTGGGCCTTTCTGAGACCCTTTAGTCTGGAGATGTGGGGCGTCACAGCCATCTTTTTCCTGGCTGTTGGAGCTGTTGTTTGGATTTTGGAGCATAGATTCAATGATGAATTCCGGGGACCTCCCAGAAAACAATTTGTCACAGTTTTGTGGTTCAGTTTTTCAACCATGTTTTTCTCCCACAGGGAAAATACAGTGAGCACACTTGGTCGGTTTGTGCTTTTGATATGGTTGTTTGTGGTACTTATAATAAACTCAAGTTACACGGCGAGCCTGACCTCAATCCTCACAGTGCAGCAGCTTTCTTCTCCCATCAAAGGCATTGAAACTTTGGTTGCTAGCAAAGAGCCGATCGGCTACCTGCAGGGTTCTTTCAGTAAAAACTATCTAATAGAAGAAATTGGGATTGATGAGTCAAGACTTGTTCCTATGAGGACACCGGAAGAGTCGGCTAAAGCATTAAGAGACGGACCCAAGAAGGGGGGTGTTGCCGCGTACGTTGATGAGCGTGCTTACATTGAACTCTTCCTCTCAAGCCGATGTGACTTCGCCATAGTAGGCCAAGAGTTTACCAGAAATGGTTGGGGATTTGCATTTCCACGGGACTCGCCTCTGGCGGTTGACTTGTCGACGGCTATATTGAAAATGGCAGAGAACGGAGATCTGCAAAGGATTCATGACAAGTGGCTTCTGAACATCGCTTGCCTGTCACAAAATGCAAAGTTTGAAGTGGACAGGCTTCGACTGAAAAGCTTTTGGGGGCTCTATCTGATGTGCGGGGTGGCGTGCGTGCTCGCATTATTAGCATATATCATAGTGATGATGAGGCAGTACAAGAAGCACTACGTGGCAGAGGTTGAGTCATGTGCCAGATCTTCTTCCAGCATCCGCACTTTCCTTACATTTGCAGACCAGAAAGAATCTGAAGTCAAAAGCCGATCCAAGAGAAGGCAAACGGAGAGGCTCTCTCTCGGAAGCTCAAATGCTGGCGGATCTTCCGTCAGAAGCATCAATTTTGCCGCTCAAGCCTGA 2757 0.4679 MAGVWSVVLMILFHRFSLTEAASNHSTRPDSVNIGVLYSFNTTVGHIVKTAIEAAIEDVNSDPSILGETKLKVSMQEDSKYRGFLSIAEALHLTAKRTVAIIGPQTSVTAHVISHIANELQVPLLSVSATDPSLSSLQFPFFVRTAHSDLYQMTAIAELVDHYGWREVIAIYVDDDHGRNGISVLGDKLAERRCRISFKAPMSPEATREEITNVLVQVALAESRVIVLHANAAWGPKVFRIAKYLEMMGSGYVWIASHFLSTLLDTNGPLPHETMEMIQGVLTLRIHTPDSELKRRFVSRWKNVTRLGLSSYSLYAYDTVYVLARALDSFFKQGNRITFSYDPKLSELLDNNLNLDSLSIFDEGKVLRESIYEVDMAGVTGTFKYASDGNLVNPAYEILNVIGTGSRRIGYWSNYTGLSVVAPEALYANPPNRSAASQKLRPVIWPGDPAQKPRGWVFPSSGRLLKIGVPVGFSYRQFVSHVQGTDMFKGFCIEVFLSALNLLPYGVPYRFVPFGDGHNNPNSYELVRLVAAGEFDGAVGDITITTQRTRMVDFTQPFIGSGLVVVAPVRKSDSSAWAFLRPFSLEMWGVTAIFFLAVGAVVWILEHRFNDEFRGPPRKQFVTVLWFSFSTMFFSHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIETLVASKEPIGYLQGSFSKNYLIEEIGIDESRLVPMRTPEESAKALRDGPKKGGVAAYVDERAYIELFLSSRCDFAIVGQEFTRNGWGFAFPRDSPLAVDLSTAILKMAENGDLQRIHDKWLLNIACLSQNAKFEVDRLRLKSFWGLYLMCGVACVLALLAYIIVMMRQYKKHYVAEVESCARSSSSIRTFLTFADQKESEVKSRSKRRQTERLSLGSSNAGGSSVRSINFAAQA 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g00027 918 Pfam Receptor family ligand binding region 48 403 IPR001828 -
Accr9g00027 918 Gene3D - 148 418 - -
Accr9g00027 918 Pfam Bacterial extracellular solute-binding proteins, family 3 522 805 IPR001638 -
Accr9g00027 918 PIRSF IGluLR_plant 1 912 IPR017103 -
Accr9g00027 918 Gene3D - 465 575 - -
Accr9g00027 918 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 880 IPR015683 -
Accr9g00027 918 FunFam Glutamate receptor 702 809 - -
Accr9g00027 918 FunFam Glutamate receptor 460 576 - -
Accr9g00027 918 SUPERFAMILY Periplasmic binding protein-like II 443 806 - -
Accr9g00027 918 Gene3D - 576 701 - -
Accr9g00027 918 SMART GluR_14 466 807 IPR001320 GO:0015276|GO:0016020
Accr9g00027 918 Pfam Ligand-gated ion channel 806 838 IPR001320 GO:0015276|GO:0016020
Accr9g00027 918 CDD PBP1_GABAb_receptor_plant 33 422 IPR044440 -
Accr9g00027 918 Gene3D - 775 805 - -
Accr9g00027 918 CDD GluR_Plant 465 805 - -
Accr9g00027 918 Gene3D - 734 774 - -
Accr9g00027 918 FunFam Glutamate receptor 148 310 - -
Accr9g00027 918 FunFam Glutamate receptor 576 706 - -
Accr9g00027 918 MobiDBLite consensus disorder prediction 896 918 - -
Accr9g00027 918 MobiDBLite consensus disorder prediction 884 918 - -
Accr9g00027 918 SUPERFAMILY Periplasmic binding protein-like I 27 457 IPR028082 -
Accr9g00027 918 Gene3D - 50 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g00027 Accr-Chr9 356043 359291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g00027 5 903 Ion Channels AT3G51480 58.960 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g00027 K05387 - gmx:100788917 1346.64