Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr9g00021 | ATGCCTCCAGCCCTCCGATTCCTCAATTCTGTCGACCGCCCCGCTCCCCCGCCCGAGCCCGTCGCCGTCGAATCCGACTTCGTCGTTATTCTCGCCGCCCTCCTCTGCGCCCTCATATGCGTCGTCGGCCTCATCGCCGTCGCCCGCTGCGCCTGGCTCCGCCGCGGATCCGCCTCCTCCCCCGCCCGGGCTCTGGCCAACAAGGGTCTCAAGAAGAAAGTTCTGCAGTCGCTCCCGAGATTCACCTACGTGAACGGAAGTCCAAATAAGTGGGTGGTGACGTCCGAGTGCGCGATTTGCCTGGGGGAGTTCACCGACGGGGACGAGATCCGGGTCCTTCCTCAGTGCGGACACGGCTTTCACATGGCCTGCATCGACACGTGGCTGGGGTCCCACTCTTCGTGCCCCTCTTGTCGGCAAATTCTGGCGGTGGCCAGGTGCCAGAGGTGCGGGCAGTACCCGGCGGGATCCGCCGGTGAAGCTGAGCTGAAGTCCAGAGAGGACGGCAATGCCGCTGCGCCTGCGAATCATAACATAAACAGCGGGTTTAATAATTTCTTGCCTTGA | 567 | 0.6296 | MPPALRFLNSVDRPAPPPEPVAVESDFVVILAALLCALICVVGLIAVARCAWLRRGSASSPARALANKGLKKKVLQSLPRFTYVNGSPNKWVVTSECAICLGEFTDGDEIRVLPQCGHGFHMACIDTWLGSHSSCPSCRQILAVARCQRCGQYPAGSAGEAELKSREDGNAAAPANHNINSGFNNFLP | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr9g00021 | 188 | CDD | RING-H2_EL5-like | 96 | 139 | - | - | |
Accr9g00021 | 188 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 144 | IPR013083 | - | |
Accr9g00021 | 188 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 21 | 151 | - | - | |
Accr9g00021 | 188 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 139 | IPR001841 | - | |
Accr9g00021 | 188 | Pfam | Ring finger domain | 96 | 139 | IPR001841 | - | |
Accr9g00021 | 188 | FunFam | E3 ubiquitin-protein ligase ATL6 | 58 | 145 | - | - | |
Accr9g00021 | 188 | SMART | ring_2 | 97 | 138 | IPR001841 | - | |
Accr9g00021 | 188 | SMART | FANCL_C_2 | 93 | 147 | - | - | |
Accr9g00021 | 188 | SUPERFAMILY | RING/U-box | 76 | 144 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr9g00021 | Accr-Chr9 | 300301 | 300867 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr9g00021 | 5 | 150 | C3H Transcription Factor Family | AT1G20823 | 61.875 | 4.13e-61 | 187 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr9g00021 | - | - | pcin:129322223 | 311.227 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr9g00021 | 9 | 300301 | 300867 | Accr10g01665 | 10 | 40645034 | 40645687 | CCT | |
Accr9g00021 | 9 | 300301 | 300867 | Accr9g00021 | 9 | 300301 | 300867 | ECH |