Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02548 ATGGAAGAAGTTTGTCTAAATAGTGAGGCAATTTTTGATGAGTGTGATGAGTTTGATGTTGAGAACTCTTCTGTATCAGAGCATGATCAGGAATCTTTGGGCTCAATATCAAAGAACCATTCACCTCCAACTGTGGGCCTGGAGTTTGATTCATTTGAAGAAGCTTATAACTTCTACAATGTTTATGCCAAGGAACAAGGTTTTGGCATTAGAGTTAGCAACTCATGGTTTAGATCAAGGAGAAAAGAGCGTTATAGAGCAAAACTCAGCTGCAGCAGTGCTGGATTCAAGAAAAAGAGTGATGCCCATAATCCAAGACCAGAAACAAGAACTGGTTGCCCAGCAATGATAGTCATTAGGATAGTGGATTCCAAAATATGGAGGATAGTGGAAGTTGAACTGCAACACAATCATCAGGTGAATCCAGGAATTAAACGGTTCTATAAGTCGCATAAGAAAATGATACTTGCAGCCAGAGAGGCACAACCACCACCAGATCCTATTACTGAAATACATACTATTAAATTGTATCGAACAGCTGTCATGGATGCTGGTTATAATGGATTCTCCAATTTCGTTGATGGACAAGAGACCAACTTTGATAATTTGAGATATTTGGAACTTAAAGAAGGGGATGGCCCTACTATTTATAATTATTTTTGTCGAATGAAACTGACAAACCCAAATTTCTTTTACTTATTTGATATTGATGATGATGGGCGCCTAAGAAATGTGTTTTGGGCTGATGCCAGGTCGAGGGCGTCTTACAGTTATTTTAATGACACTGTTATTATAGATACAACTTGTTTGACAAACAAATATGAGATCCCTCTGATATCATTTGCTGGTGTAAACAACCACGGACAGTTGGTGCTACTGGGCTGTGGCTTTCTTGGGTATGAAAAGGTTGATAATTTCGTTTGGATTTTTAATGCATGGCTAAAATGTATGCTTGGTTGTCCGCCACATGTTGTTATTACTGACCAGTGCAAGCCCTTGCAAACTGCAGTTGCTCGGGTTTTTCCTCATGCTCGTCATTGTTATTCTTTGCAATATATCATGCAGAGAGTTCCAGAAAAGTTGGGAGGGTTGAAGGGATATGAAACAATCATAAAGCAATTGAACAAAGCAGTTTATGAGTCCTTAAAGATAGTCGAGTTTGAAAATTATTGGGCTGATATGATCAAGCAGCATGGATTGGGGGATAACAAATGGCTTCAAACATTGTATAACGATAGGCATCTGTGGGTTCCGGTTTACCTCAAAGATACTTTTTTGGCAGGAACGGTCCCTACAACAGAGAATGAGGGCCTGATTGCATATTTTGATGGATATGTGCACAAGCATACCTCCTTCAAGGAATTCATTGACAAGTATGACCTAGCTCTACATAGGAAGAACTTGAGAGAAGCCATGACAGAGTTGGAGTCAAGGAAATCAAGTGTTGTATTGAATACAAGGTGTAATTTTGAACTGCAGTTATCAAAGTTGTACACCAAAGAAATCTTTAAAAAATTCCAGTCTGAGGTTGACGGTATGTACTCATGCTTCAATACAAGACAGGTAAATGTTAATGGATCTATAATAACATATATAGTGAAAGAACGAGTTGAAAATAAGGCAAATGAGAAGGAGATCAAAAAATTTGAAGTCTTGTATGAAGCAAATGAACTGGACATACGGTGTATCTGCGGTTTGTTCAATTACAAAGGTTATCTTTGTAGGCATGCTCTGAATGTTCTGAATTATAATGGTGTGGAGGAAGTCCCATGTCGGTTCATTCTGCAACGTTGGAAGAAAGATTTCAAACAAAGGTTTATTCAAGAGCATGTCTCTGGTAACGCTGATACATACAACCCTGTTGCTGGGCATAGACAACTTTTTCATAACGCTCTTCCAGTGCTAGAAGAAGGGGCACAGTCGCAAGAGCATTACATGATTGCTTTACGAGAACTGGAACAGTTGTTAAACAAGTTTGATCTATTGTAG 1989 0.3871 MEEVCLNSEAIFDECDEFDVENSSVSEHDQESLGSISKNHSPPTVGLEFDSFEEAYNFYNVYAKEQGFGIRVSNSWFRSRRKERYRAKLSCSSAGFKKKSDAHNPRPETRTGCPAMIVIRIVDSKIWRIVEVELQHNHQVNPGIKRFYKSHKKMILAAREAQPPPDPITEIHTIKLYRTAVMDAGYNGFSNFVDGQETNFDNLRYLELKEGDGPTIYNYFCRMKLTNPNFFYLFDIDDDGRLRNVFWADARSRASYSYFNDTVIIDTTCLTNKYEIPLISFAGVNNHGQLVLLGCGFLGYEKVDNFVWIFNAWLKCMLGCPPHVVITDQCKPLQTAVARVFPHARHCYSLQYIMQRVPEKLGGLKGYETIIKQLNKAVYESLKIVEFENYWADMIKQHGLGDNKWLQTLYNDRHLWVPVYLKDTFLAGTVPTTENEGLIAYFDGYVHKHTSFKEFIDKYDLALHRKNLREAMTELESRKSSVVLNTRCNFELQLSKLYTKEIFKKFQSEVDGMYSCFNTRQVNVNGSIITYIVKERVENKANEKEIKKFEVLYEANELDIRCICGLFNYKGYLCRHALNVLNYNGVEEVPCRFILQRWKKDFKQRFIQEHVSGNADTYNPVAGHRQLFHNALPVLEEGAQSQEHYMIALRELEQLLNKFDLL 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02548 662 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Accr8g02548 662 SMART 26again6 560 587 IPR006564 GO:0008270
Accr8g02548 662 Pfam MULE transposase domain 263 355 IPR018289 -
Accr8g02548 662 Pfam SWIM zinc finger 550 582 IPR007527 GO:0008270
Accr8g02548 662 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 659 IPR031052 GO:0006355
Accr8g02548 662 Pfam FAR1 DNA-binding domain 57 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02548 Accr-Chr8 49504089 49506077 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr8g02548 MULE 2.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02548 K17604 - gmx:100811666 1083.55