Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02547 ATGAAGCTTGGATTTGTCCTCATTTCCTTTATATTTTGCGGGTTGATAGCTAAATCAGTTTATTCTTCAAAACCCAGAGACCCATACCTTGGAGTTGCTCCTGAAGATCATAAGTATTACAAGTCGTCAGCTGTAATACCATGTAAAGATGGATCCAAGGAATTCACCAAAGCTCAGCTCAATGACGATTTCTGTGACTGCTCCGATGGCACCGATGAGCCAGGTACTTCCGCATGTCCAAGCGGAAAATTTTTTTGTCGGAATGCAGGGCATGTTTCCCGTTTCCTATACTCATCTAGAGTGAATGATGGAATATGTGATTGCTGTGATGGAAGTGACGAATATGACGGCAAAGTAAAATGCCCAAATAATTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAACTGAAAAGAAAGATCGTCACATATGAAGAAGGTATCTTGTTGCGAAAGCAAGAAGTTGAAGAGGCACGACTAGCTCTAGCAAGAGATGAGGCAGAACTTTCTAAGTTAAGCAAAGAAGAAAGTATGCTTAAAGGGATTGTGCAACAGCTGAAGGAGCATAAAGAACAGATAGAGAAGGTAGAGGAGAAGGAAAGATTGCGGAAGGAAAAAGAAGAGAAGCAGAAAAAGGAGGCTGAGAGGAAAGCTAATGAAGAGAACCCTAAACTGGATGGAGAAGATACACAGCAAAGTAATGAAGCTGTGGAGCAATCTGAAGGCAAAGACAGCGATGTGGCTAGTAACCATGATAGAAGTGGCTCTATCAATGATTCTCCTATACAAAAGGATGTGGAAGAGGATCAGAAGTTGGCAGATGTGCTTGATAATGTTAATGGAGCCCCTAATAGTCCTGGAAGTGAAGGCTCTACACATATACGAGCAGAAGAGGGAAATGATTTACCTGAAAGTACTGAGGGATTGTCAAAGGAAGAGTTGGGTAGGCTCGTTGCTTCCCGTTGGACAGGAGAAAATCCTACCAAGCAAAGTGGTGAAGCTGATGCAACAATTAATAAGGCTGATGAAGATAGTGAAGATATTCCACAGGAGACAAATCATGAGGAATATGAAAGTTATGTGTCTGAAACAGATGATGATAGCCACAAATATGATGATATTGATGTAGAAGATGAAATGGATGAAGACTTTCATGAGGAGCATGAAGACCTTAGCTCCTACAAATCTGACAGTGATATTACTCCTGATTTGTCAGCAAACAATCCTTCTTGGTTAGAGAAAATACAGAAAGCTGCACGAAACATTTTTCAGGCTGTTAATTTTTTTCAGACTCCAGTGAACCAGTCAGATGCTGCTCGAGTGCGCAGGGAGTATGATGAGTCAAGTACCAAATTATCTAAATTACAGTCAAGAATATCTAGTTTGAAGCAAAAGCTAAAGCATGATTTTGGTCCTGAGAAGGAGTTCTATTCATGCTATGATCGTTGTTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAAGAGGCCTCTCAGGAGGAAGGCTATAGCACCACACGATTGGGACGGTGGGACAAATTTGAAGACTCATACAGAGTAATGGTTTTTTCTAATGGTGATAAATGTTGGAATGGGCCTGATAGGAGTTTGAAGGTCAGGCTAAGATGTGGGCTGACAAATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAGTACGTAGCATTCTTGTCTACCCCAGCCGTTTGCCGTGAGGAAAAGCTCAAGGAGCTACAACACAAGCTGGACTTGATGAATAAGGAACAACCTCAAAGTCATGATGAGCTGTGA 1800 0.4183 MKLGFVLISFIFCGLIAKSVYSSKPRDPYLGVAPEDHKYYKSSAVIPCKDGSKEFTKAQLNDDFCDCSDGTDEPGTSACPSGKFFCRNAGHVSRFLYSSRVNDGICDCCDGSDEYDGKVKCPNNCWEAGKVARDKLKRKIVTYEEGILLRKQEVEEARLALARDEAELSKLSKEESMLKGIVQQLKEHKEQIEKVEEKERLRKEKEEKQKKEAERKANEENPKLDGEDTQQSNEAVEQSEGKDSDVASNHDRSGSINDSPIQKDVEEDQKLADVLDNVNGAPNSPGSEGSTHIRAEEGNDLPESTEGLSKEELGRLVASRWTGENPTKQSGEADATINKADEDSEDIPQETNHEEYESYVSETDDDSHKYDDIDVEDEMDEDFHEEHEDLSSYKSDSDITPDLSANNPSWLEKIQKAARNIFQAVNFFQTPVNQSDAARVRREYDESSTKLSKLQSRISSLKQKLKHDFGPEKEFYSCYDRCFESKQNKYTYKVCPYKEASQEEGYSTTRLGRWDKFEDSYRVMVFSNGDKCWNGPDRSLKVRLRCGLTNEITDVDEPSRCEYVAFLSTPAVCREEKLKELQHKLDLMNKEQPQSHDEL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02547 599 Pfam Glucosidase II beta subunit-like protein 441 597 IPR036607 -
Accr8g02547 599 Pfam Glucosidase II beta subunit-like 12 160 IPR028146 -
Accr8g02547 599 Gene3D - 475 573 IPR009011 -
Accr8g02547 599 MobiDBLite consensus disorder prediction 335 368 - -
Accr8g02547 599 Coils Coil 437 464 - -
Accr8g02547 599 MobiDBLite consensus disorder prediction 199 401 - -
Accr8g02547 599 MobiDBLite consensus disorder prediction 199 227 - -
Accr8g02547 599 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 6 599 IPR039794 -
Accr8g02547 599 MobiDBLite consensus disorder prediction 369 385 - -
Accr8g02547 599 MobiDBLite consensus disorder prediction 293 310 - -
Accr8g02547 599 Coils Coil 154 223 - -
Accr8g02547 599 SUPERFAMILY Mannose 6-phosphate receptor domain 480 573 IPR009011 -
Accr8g02547 599 ProSiteProfiles MRH domain profile. 480 575 IPR044865 -
Accr8g02547 599 Coils Coil 571 591 - -
Accr8g02547 599 CDD LDLa 79 114 IPR002172 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02547 Accr-Chr8 49464009 49485560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02547 22 599 Calmodulin-binding Proteins AT5G56360 58.333 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02547 K08288 - gmx:100807083 784.252