Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02546 ATGAAGCTTGGATTTGTCCTCATTTCCTTTATATTTTGCGGGTTGATAGCTAAATCAGTTTATTCTTCAAAACCCAGAGACCCATACCTTGGAGTTGCTCCTGAAGATCATAAGTATTACAAGTCGTCAGCTGTAATACCATGTAAAGATGGATCCAAGGAATTCACCAAAGCTCAGCTCAATGACGATTTCTGTGACTGCTCCGATGGCACCGATGAGCCAGGTACTTCCGCATGTCCAAGCGGAAAATTTTTTTGTCGGAATGCAGGGCATGTTTCCCGTTTCCTATACTCATCTAGAGTGAATGATGGAATATGTGATTGCTGTGATGGAAGTGACGAATATGACGGCAAAGTAAAATGCCCAAATAATTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAACTGAAAAGAAAGATCGTCACATATGAAGAAGGTATCTTGTTGCGAAAGCAAGAAGTTGAAGAGGCACGACTAGCTCTAGCAAGAGATGAGGCAGAACTTTCTAAGTTAAGCAAAGAAGAAAGTATGCTTAAAGGGATTGTGCAACAGCTGAAGGAGCATAAAGAACAGATAGAGAAGGTAGAGGAGAAGGAAAGATTGCGGAAGGAAAAAGAAGAGAAGCAGAAAAAGGAGGCTGAGAGGAAAGCTAATGAAGAGAACCCTAAACTGGATGGAGAAGATACACAGCAAAGTAATGAAGCTGTGGAGCAATCTGAAGGCAAAGACAGCGATGTGGCTAGTAACCATGATAGAAGTGGCTCTATCAATGATTCTCCTATACAAAAGGATGTGGAAGAGGATCAGAAGTTGGCAGATGTGCTTGATAATGTTAATGGAGCCCCTAATAGTCCTGGAAGTGAAGGCTCTACACATATACGAGCAGAAGAGGGAAATGATTTACCTGAAAGTACTGAGGGATTGTCAAAGGAAGAGTTGGGTAGGCTCGTTGCTTCCCGTTGGACAGGAGAAAATCCTACCAAGCAAAGTGGTGAAGCTGATGCAACAATTAATAAGGCTGATGAAGATAGTGAAGATATTCCACAGGAGACAAATCATGAGGAATATGAAAGTTATGTGTCTGAAACAGATGATGATAGCCACAAATATGATGATATTGATGTAGAAGATGAAATGGATGAAGACTTTCATGAGGAGCATGAAGACCTTAGCTCCTACAAATCTGACAGTGATATTACTCCTGATTTGTCAGATGACATTACAGCAAACAATCCTTCTTGGTTAGAGAAAATACAGAAAGCTGCACGAAACATTTTTCAGGCTGTTAATTTTTTTCAGACTCCAGTGAACCAGTCAGATGCTGCTCGAGTGCGCAGGGAGTATGATGAGTCAAGTACCAAATTATCTAAATTACAGTCAAGAATATCTAGTTTGAAGCAAAAGCTAAAGCATGATTTTGGTCCTGAGAAGGAGTTCTATTCATGCTATGATCGTTGTTTTGAGAGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAAGAGGCCTCTCAGGAGGAAGGCTATAGCACCACACGATTGGGACGGTGGGACAAATTTGAAGACTCATACAGAGTAATGGTTTTTTCTAATGGTGATAAATGTTGGAATGGGCCTGATAGGAGTTTGAAGGTCAGGCTAAGATGTGGGCTGACAAATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAGTACGTAGCATTCTTGTCTACCCCAGCCGTTTGCCGTGAGGAAAAGCTCAAGGAGCTACAACACAAGCTGGACTTGATGAATAAGGAACAACCTCAAAGTCATGATGAGCTGTGA 1812 0.4178 MKLGFVLISFIFCGLIAKSVYSSKPRDPYLGVAPEDHKYYKSSAVIPCKDGSKEFTKAQLNDDFCDCSDGTDEPGTSACPSGKFFCRNAGHVSRFLYSSRVNDGICDCCDGSDEYDGKVKCPNNCWEAGKVARDKLKRKIVTYEEGILLRKQEVEEARLALARDEAELSKLSKEESMLKGIVQQLKEHKEQIEKVEEKERLRKEKEEKQKKEAERKANEENPKLDGEDTQQSNEAVEQSEGKDSDVASNHDRSGSINDSPIQKDVEEDQKLADVLDNVNGAPNSPGSEGSTHIRAEEGNDLPESTEGLSKEELGRLVASRWTGENPTKQSGEADATINKADEDSEDIPQETNHEEYESYVSETDDDSHKYDDIDVEDEMDEDFHEEHEDLSSYKSDSDITPDLSDDITANNPSWLEKIQKAARNIFQAVNFFQTPVNQSDAARVRREYDESSTKLSKLQSRISSLKQKLKHDFGPEKEFYSCYDRCFESKQNKYTYKVCPYKEASQEEGYSTTRLGRWDKFEDSYRVMVFSNGDKCWNGPDRSLKVRLRCGLTNEITDVDEPSRCEYVAFLSTPAVCREEKLKELQHKLDLMNKEQPQSHDEL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02546 603 ProSiteProfiles MRH domain profile. 484 579 IPR044865 -
Accr8g02546 603 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 6 603 IPR039794 -
Accr8g02546 603 Pfam Glucosidase II beta subunit-like protein 445 601 IPR036607 -
Accr8g02546 603 MobiDBLite consensus disorder prediction 335 368 - -
Accr8g02546 603 Coils Coil 441 468 - -
Accr8g02546 603 Gene3D - 479 577 IPR009011 -
Accr8g02546 603 MobiDBLite consensus disorder prediction 199 401 - -
Accr8g02546 603 MobiDBLite consensus disorder prediction 386 401 - -
Accr8g02546 603 MobiDBLite consensus disorder prediction 199 227 - -
Accr8g02546 603 MobiDBLite consensus disorder prediction 369 385 - -
Accr8g02546 603 MobiDBLite consensus disorder prediction 293 310 - -
Accr8g02546 603 Pfam Glucosidase II beta subunit-like 12 160 IPR028146 -
Accr8g02546 603 SUPERFAMILY Mannose 6-phosphate receptor domain 484 577 IPR009011 -
Accr8g02546 603 Coils Coil 154 223 - -
Accr8g02546 603 Coils Coil 575 595 - -
Accr8g02546 603 CDD LDLa 79 114 IPR002172 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02546 Accr-Chr8 49464009 49485560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02546 22 603 Calmodulin-binding Proteins AT5G56360 58.307 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02546 K08288 - gmx:100807083 784.637