Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02539 ATGGGCAACTGCTGGTTTTCTCGGGAATCCTCAGTTTACAGAGTGTCGTCCAATGCTAAGTCAGACTCACCCAAGGACCAAATTCACGCCATCAAACCAAGGAACGATGATAGCAAGTTACCATCCAACCCCGAAGAAGTAGAAGTCCTACGCCGTGATTCAGCTGCGAAGCCATTGATTGCCTTCACGTACGATGAACTAAAGGAAATCACTGGAAATTTTAGGCAAGATCGTCTTTTGGGTGGAGGAGGATTTGGAAGTGTTTACAAGGGTTTTATTTCTGAGGACGTCAGAGAGGGCCTTCCTCCTCTTACTGTAGCTGTCAAGGTACATGATGGTAACAACAGTCATCAAGGGCACAGAGAATGGCTGGCGGAAGTCATATTTCTCGGTCAGCTTTCTCATCCAAATTTGGTCCAATTAATTGGATACTGCTGCGAAGACGAACATAGGGTGCTCATATATGAGTACATGGCCCGAGGAAGTGTGGAAAATAATCTCTTTTCCAGAGTATTGCTTCCCCTACCATGGTCCATAAGAATGAAGATCGTATTTGGCGCTGCTAAGGGACTTGCATTTCTTCATGAAGCAGAGAAGCCTGTTATCTATCGTGACTTTAAGACATCAAATATATTATTGGACCTGGACTACAATGCAAAACTTTCTGACTTTGGCCTTGCTAAGGATGGACCTGTCGGCGACAAATCTCACGTCTCTACTCGCATAATGGGAACTTATGGATATGCGGCACCCGAATACATATTGACTGGTCATCTGACCCCTAGAAGTGATGTGTACAGTTTTGGTGTTGTTCTTCTTGAACTTCTGACCGGAAGAAAATCTCTAGATAAGTCACGGCCGGCTCGGGAGCAGAACCTGGCAGATTGGGCTCTTCCCTTGCTGAAGGAAAAGAAGAAATTGTTGAATATAATTGATCCTAGACTGGAAGGCGAGTATCCTATAAAAGGAGTTCACAAGGCCGCGATGCTAGCTTATCATTGCTTGAATCGCAATCCTAAAGCAAGGCCTTTAATGCGAGATATAGTAGATTCGTTGGAGCCTCTGCAGCTTCACAATGATGTTTCTATTGGAAAAACATTGACCATCATCAGTGAGGTTCCTCAACCCAGAATAATCCCTCATGGCTAG 1149 0.4465 MGNCWFSRESSVYRVSSNAKSDSPKDQIHAIKPRNDDSKLPSNPEEVEVLRRDSAAKPLIAFTYDELKEITGNFRQDRLLGGGGFGSVYKGFISEDVREGLPPLTVAVKVHDGNNSHQGHREWLAEVIFLGQLSHPNLVQLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSIRMKIVFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLADWALPLLKEKKKLLNIIDPRLEGEYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLHNDVSIGKTLTIISEVPQPRIIPHG 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02539 382 MobiDBLite consensus disorder prediction 25 43 - -
Accr8g02539 382 FunFam Probable serine/threonine-protein kinase PBL8 158 370 - -
Accr8g02539 382 SUPERFAMILY Protein kinase-like (PK-like) 48 352 IPR011009 -
Accr8g02539 382 Gene3D Phosphorylase Kinase; domain 1 36 157 - -
Accr8g02539 382 Pfam Protein tyrosine and serine/threonine kinase 76 352 IPR001245 GO:0004672|GO:0006468
Accr8g02539 382 PANTHER OS01G0588500 PROTEIN-RELATED 35 356 - -
Accr8g02539 382 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Accr8g02539 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Accr8g02539 382 FunFam Serine/threonine-protein kinase BIK1 41 157 - -
Accr8g02539 382 ProSiteProfiles Protein kinase domain profile. 74 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02539 382 MobiDBLite consensus disorder prediction 16 43 - -
Accr8g02539 382 Gene3D Transferase(Phosphotransferase) domain 1 158 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02539 Accr-Chr8 49267524 49271890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02539 3 376 Glycoside Hydrolase AT3G07070 45.736 1.20e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr8g02539 PK_Tyr_Ser-Thr 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02539 - - zju:107415086 659.062