Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02524 ATGGCGACTTTGATCGAGCCACCGAATAAAATTGGGCCAAAGGGGAAGCATTATTACTCCATATGGCAAACAGTGTTTGAGATTGATACAAAGTACGTTCCAATAAAGCCCATCGGCCGAGGAGCATATGGTGTAGTGTGCTCTTCCATCAACAGGGAAACCAATGAGAAAGTTGCAATTAAGAAGATCGGTAATATATTTGAGAATCGCATTGATGCATTGAGAACGCTGAGGGAATTGAAGCTGCTTAGACATATCAGGCACGAAAATGTGATTGCTTTGAAGGATGTTATGTTGCCTGCCCAGAGAGCATGTTTCAAGGATGTGTACTTGGTTTATGAACTCATGGATACTGATCTTCATCAGATAATTAAATCTTCGCAGCCCCTCTCCAATGATCATTGCAAATATTTTATATTTCAGTTGCTTCGAGGTCTCAAATATCTTCACTCTGCAAATATCCTTCATCGGGACTTGAAGCCTGGAAATCTGCTCATCAATGCCAACTGTGATCTGAAGATCTGTGACTTTGGGCTTGCACGAACAAATGGAGGCGATGGGCAGTTCATGACGGAGTATGTTGTGACTCGATGGTACCGTGCACCGGAGCTGCTCTTGTGCTGTGAAAATTATGGAACCTCAATTGATGTGTGGTCTGTGGGGTGCATTTTTGCTGAGATTCTGGGAAGAAAACCAATATTTCCTGGAACTGAATGCCTCAACCAATTGAAACTCATTATACGTGTGCTGGGAAGCCAGGACGAGTCTGATCTAGCGTTTATTGATAATCCAAAGGCCAGGAGGTATATCAAGTCACTGCCTTACACAAGAGGCGTGCACTTGTCTCAGCTATACCCGCAAGCAGATCCATTAGCCATGGATTTATTGCAGAAAATGCTGGTGTTCGATCCGACCAAGAGAATTACCATCATGGAAGCGCTGCAACACCCATATATGGCGGGCCTTTATGATCCGAGATCTAATCCTCCTGCCCAGGTTCCAATCAATCTGGACATAGATGAAAACTGGAGGGAACCCACCATTAGGGAAATGATGTGGAACGAGATGCTTCATTATCATCCCCAAGCTTCTGCCATTGCTTAG 1104 0.442 MATLIEPPNKIGPKGKHYYSIWQTVFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENRIDALRTLRELKLLRHIRHENVIALKDVMLPAQRACFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIRVLGSQDESDLAFIDNPKARRYIKSLPYTRGVHLSQLYPQADPLAMDLLQKMLVFDPTKRITIMEALQHPYMAGLYDPRSNPPAQVPINLDIDENWREPTIREMMWNEMLHYHPQASAIA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02524 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 329 - -
Accr8g02524 367 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Accr8g02524 367 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02524 367 Gene3D Phosphorylase Kinase; domain 1 19 353 - -
Accr8g02524 367 FunFam Mitogen-activated protein kinase 18 126 - -
Accr8g02524 367 CDD STKc_TEY_MAPK 26 361 - -
Accr8g02524 367 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Accr8g02524 367 FunFam Mitogen-activated protein kinase 116 345 - -
Accr8g02524 367 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Accr8g02524 367 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02524 367 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Accr8g02524 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Accr8g02524 367 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02524 Accr-Chr8 48975256 48976992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02524 1 363 MAP Kinase Gene Family AT2G18170 85.950 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Accr8g02524 Pkinase 2.6e-70 CL0016