Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02518 ATGAGAAAGGCGTCGTCCCGGGCAAAGACCACTACACCTTGCTGCAGCAAAGTAGGGCTGAAGAGAGGCCCTTGGACTCCTGAGGAAGACGAGCTGCTGTCCAACTACATCCACAAGGAGGGAGAGGGCAGGTGGCGCACACTCCCAAAGAGAGCGGGTCTCCTCCGCTGCGGGAAAAGCTGCCGACTCCGCTGGATGAACTATCTCCGCCCCTCCGTCAAGCGCGGCCACATCGCCCCCGACGAGGAGGATCTCATCCTCCGCCTCCACCGCCTCCTCGGCAACCGGTGGTCGCTGATAGCGGGGAGGATCCCGGGGAGAACGGACAACGAGATAAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATCAGCCAAGGCATTGATCCCCGTACCCACAAGCCCTTCCCCCCTCATGATAATACTATTACGAATACTCATCCTTCTCCCTCTAAACCTAATCCCAATCCCATTCCCAATATGACTGATCATCATCAGCAGGACCCCAATCCCTACTCTCACCCCTATGATCATCACGCTTTGGCCCTCGGGGATCTCCCTGCGATCCCCTTGCCCAACACCCCCAGCAATCCCAATGACGACGACGACGACGACATCAACTACTCCACCGACGATGTTTTCTCCTCTTTCATCAACTCCCTCATCAACGACGATGCATTTGCCTCCGCTCAACACCACCACCTCCCTCCTCCGCCTCCTCCTTATAATTCTGTGGCCTGGGAGTCTTCCCTGATCTCCGCTGCTCCCCACCACGATCCCAACAATATGCCCGGTCATGCTCATGCTGATGCTGTCCTCTAG 825 0.5673 MRKASSRAKTTTPCCSKVGLKRGPWTPEEDELLSNYIHKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGHIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPFPPHDNTITNTHPSPSKPNPNPIPNMTDHHQQDPNPYSHPYDHHALALGDLPAIPLPNTPSNPNDDDDDDINYSTDDVFSSFINSLINDDAFASAQHHHLPPPPPPYNSVAWESSLISAAPHHDPNNMPGHAHADAVL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02518 274 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr8g02518 274 Pfam Myb-like DNA-binding domain 80 120 IPR001005 -
Accr8g02518 274 CDD SANT 80 120 IPR001005 -
Accr8g02518 274 FunFam transcription repressor MYB5-like 79 147 - -
Accr8g02518 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Accr8g02518 274 CDD SANT 24 69 IPR001005 -
Accr8g02518 274 SMART sant 74 122 IPR001005 -
Accr8g02518 274 SMART sant 21 71 IPR001005 -
Accr8g02518 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Accr8g02518 274 Gene3D - 19 75 - -
Accr8g02518 274 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 12 188 - -
Accr8g02518 274 MobiDBLite consensus disorder prediction 129 209 - -
Accr8g02518 274 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr8g02518 274 FunFam Myb transcription factor 19 75 - -
Accr8g02518 274 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Accr8g02518 274 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr8g02518 274 Gene3D - 79 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02518 Accr-Chr8 48924515 48925434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02518 8 225 MYB Transcription Factor Family AT3G13540 60.550 3.84e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr8g02518 Myb_DNA-binding 5.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02518 K09422 - gmx:100797847 317.005