Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02508 ATGAGAGGAAGGAGCTATAGTCCATCGCCGCCCAGGGGTTATGGCAGAAGGGGAAGAAGTCCTAGCCCCAGAGGTCGTTATGGTGGTCGTGCCAGAGATCTCCCTACCAGTCTTCTTGTTCGCAACCTTCGCCATGACTGTAGGGCCGAGGACCTTCGTAGACTTTTTGGACAATTTGGTGCTCTTAAGGACATTTACCTCCCGAAAGATTATTATACTGGAGAACCCCGAGGCTTTGGTTTTATCCAATATGTAGATCCTGCTGATGCTGCAGATGCAAAATATCATGTGGATGGTCAAGTTCTTCTTGGTCGAGAGTTGACAGTTGTTTTCGCTGAGGAGAACAGGAAGAAGCCTACTGAGATGAGAGCAAGAGAAAGAAGGGGCCGATTTTCTGATCGAAGAAGGTCTCCACCTCGTTATTCTCGTTCTCCTCGGTACTCTAGGTCACCACCACGTCATAGATCTCGATCTCGAAGCCGTGATTATAATTCTCCCCCTCCTAAACGAAGGGAGTATTCAAGATCCGTGTCACCTAAAGATAGAAGATGCAGTCGAGAAAGAGAGAGAGAAACATCATACTCACGGCAGAGTAGGGAGAGGTCATACTCACGGCAGAGTAGGGAGAGGTCATACTCACGTTCTCCGCCCTATAATGGTGGCTCAAGGAGCCGTAGTCAGAGTCCAGCTAAGGGTCCAAGCGGGAGCCGCAGTCAGAGCCCCAATCGTGATGATTATCCAAGGGAACCAGTTCGTGGCAGGTCTCCCAGTCAATGA 777 0.4981 MRGRSYSPSPPRGYGRRGRSPSPRGRYGGRARDLPTSLLVRNLRHDCRAEDLRRLFGQFGALKDIYLPKDYYTGEPRGFGFIQYVDPADAADAKYHVDGQVLLGRELTVVFAEENRKKPTEMRARERRGRFSDRRRSPPRYSRSPRYSRSPPRHRSRSRSRDYNSPPPKRREYSRSVSPKDRRCSRERERETSYSRQSRERSYSRQSRERSYSRSPPYNGGSRSRSQSPAKGPSGSRSQSPNRDDYPREPVRGRSPSQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02508 258 MobiDBLite consensus disorder prediction 1 31 - -
Accr8g02508 258 SUPERFAMILY RNA-binding domain, RBD 36 141 IPR035979 GO:0003676
Accr8g02508 258 MobiDBLite consensus disorder prediction 117 140 - -
Accr8g02508 258 SMART rrm1_1 37 110 IPR000504 GO:0003723
Accr8g02508 258 MobiDBLite consensus disorder prediction 117 258 - -
Accr8g02508 258 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 35 241 - -
Accr8g02508 258 Gene3D - 30 146 IPR012677 -
Accr8g02508 258 MobiDBLite consensus disorder prediction 157 208 - -
Accr8g02508 258 MobiDBLite consensus disorder prediction 209 241 - -
Accr8g02508 258 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Accr8g02508 258 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02508 Accr-Chr8 48803205 48806980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02508 3 99 Eukaryotic Initiation Factors Gene Family AT3G11400 35.849 2.34e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02508 K12900 - gmx:100775883 281.952