Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02459 ATGCGTTGCCATGTCGTGACTGTTCCCGGAAGCGATTATCGCTTCTTCTCCCCAACGCCCTTATCTGTCCCCGCCACCATCACCTTCAATCCCAAGTCTCTCAGTTTCCCATATCGAATCGGCGGTCTCAGAGTTAAAGCCGCCGTAAACGACAGCTATGTGGCGGAGGCCTCCAAGTTGAGCTTCTACGAGCTTCTAGGTATACCGGAATCTGGGTCCTTGCTCGAGATCAAGCAGGCCTATAAGCAGCTCGCCCGCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGGAGGAATATACCAAGAGGTTTATTCAGGTGCAGGAAGCCTATGAGACCTTGTCCGATCCCAGAAGGAGGGCTATGTATGATGGCGACATGGCCAGAGGAATTCACCTTGCCTTCTCCGCTCGCCGGTGTTACCACGACGATGAGGCAATTGAACAAAAAAGTGAGTGGAAAGCTCGTTGGCAGAGTCAGCTATCAGAGCTGAAGAGAAGAAGCCAGGCGAAGAAGAATGGAGAAAACCTGTCGTGGGCAGCTCGAATGCGTTGTCGAAGAGCAGAATCGAGTGACGAGTCCTAA 588 0.5306 MRCHVVTVPGSDYRFFSPTPLSVPATITFNPKSLSFPYRIGGLRVKAAVNDSYVAEASKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRVEEYTKRFIQVQEAYETLSDPRRRAMYDGDMARGIHLAFSARRCYHDDEAIEQKSEWKARWQSQLSELKRRSQAKKNGENLSWAARMRCRRAESSDES 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02459 195 CDD DnaJ 62 117 IPR001623 -
Accr8g02459 195 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Accr8g02459 195 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 51 192 - -
Accr8g02459 195 FunFam Chaperone protein dnaJ 20, chloroplastic 47 156 - -
Accr8g02459 195 SUPERFAMILY Chaperone J-domain 58 128 IPR036869 -
Accr8g02459 195 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Accr8g02459 195 Gene3D DnaJ domain 47 179 IPR036869 -
Accr8g02459 195 PRINTS DnaJ domain signature 100 120 IPR001623 -
Accr8g02459 195 PRINTS DnaJ domain signature 63 81 IPR001623 -
Accr8g02459 195 PRINTS DnaJ domain signature 81 96 IPR001623 -
Accr8g02459 195 Pfam DnaJ domain 62 125 IPR001623 -
Accr8g02459 195 SMART dnaj_3 60 120 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02459 Accr-Chr8 48283273 48284709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02459 57 125 C2H2 Transcription Factor Family AT1G74250 41.667 1.40e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02459 - - qsa:O6P43_002609 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02459 8 48283273 48284709 Accr8g02459 8 48283273 48284709 ECH