Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02454 ATGGCACTGTTTAACAAACTTGGGAGTCTATTAAGGCAGGGTGCCGCACAAGACAGACAAGTGCCAGTTGCGTCAATGCTGAATTTTGCTCGCTGCATGTCATCCTCCAAGCTTTTCATTGGCGGCCTTTCTTATGGAGTCGATGATCAATCTCTCAGGGATGCGTTTGCCAGCTTTGGAGATGTGGTCGAGGCAAGGGTTATAACTGATAGAGACTCTGGAAGGTCAAGAGGGTTTGGATTTGTCAATTACACCAGTGATGAATCTGCTAGTTCTGCTATTTCTGCAATGGATGGGCAGGAGCTAAATGGGAGAAGCATTCGGGTGAGCTATGCGACTGACAGACCATCCGCACCTCGATCGTTTGGCGGCAGCGGTGGTTTTGGTGGTGGTGGTGGTTACCGTAGGAATGATGGAGGCTTTGACAATTCATCCTTTTAA 441 0.4853 MALFNKLGSLLRQGAAQDRQVPVASMLNFARCMSSSKLFIGGLSYGVDDQSLRDAFASFGDVVEARVITDRDSGRSRGFGFVNYTSDESASSAISAMDGQELNGRSIRVSYATDRPSAPRSFGGSGGFGGGGGYRRNDGGFDNSSF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02454 146 MobiDBLite consensus disorder prediction 113 146 - -
Accr8g02454 146 FunFam Glycine-rich RNA-binding protein 2 25 146 - -
Accr8g02454 146 SMART rrm1_1 37 110 IPR000504 GO:0003723
Accr8g02454 146 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Accr8g02454 146 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Accr8g02454 146 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 9 135 - -
Accr8g02454 146 CDD RRM2_NsCP33_like 37 112 - -
Accr8g02454 146 Gene3D - 17 145 IPR012677 -
Accr8g02454 146 SUPERFAMILY RNA-binding domain, RBD 33 143 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02454 Accr-Chr8 48231300 48232508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02454 35 121 Eukaryotic Initiation Factors Gene Family AT1G49760 40.230 6.64e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02454 - - qsa:O6P43_023573 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02454 8 48231300 48232508 Accr8g02454 8 48231300 48232508 ECH