Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02447 ATGGACGGCGGTGCGCCACTTTCCTCTGCTGGCTCCGGCGGAACTGGAGGTCCAGCACCTTTCCTTATCAAGACCTATGAAATGGTCGACGATTCTACCACCGATGATATTGTATCGTGGAGCCCCACCAACAACAGCTTCGTCGTCTGGAATCACCCTGAGTTCGCTCGTCTTCTTCTTCCTACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGTCAGCTCAACACCTACGGGTTTCGGAAAATACATCCTGAGCGGTGGGAGTTCGCTAATGATGATTTTGTAAAAGATCAAAAGCATCTTCTCAAGAATATTCACCGTAGGAAACCTATCCACAGTCACAGCAATCCTCCAGGCTCCGGTGTGGACCCAGAACGAGCAGCATTTGAGGACGAAATAGAGAAACTTACACGTGAGAAATCTGCTCTGGAATCCAACATCATCAGATTTAAACAACAAGCGGCTGTAAAGCTTCAGCTGGAAGATCTGTTGCAGCGATTAGACGGTGTGGAGAAGAAACAGAAGAATTTGCTGAACTTCTTTGAAAAGTATCTTCAGAATCCTTGTTTTGTTGAACATCTTTCACGGAAACTTGATTGCATGGATTTATCAGCATATAATAAGAAAAGAAGATTACCTCAGGTTGATCACTCGGCACCTGTTGGTGAAAGTAACTTGGTTGAAAATCATGGCAATTTTAGAACAGAATTTGGCACTGTCTTCCACCAAGATTTCTCAAATAAACTCAGATTGGAGTTATCACCAGCTGTATCAGATATGAATTTGGTATCACGTAGCACTCAGAGTTCCAATGAAGACGGGGAAAATCCACAGAAGAGGCCATCTGAAGAAACGCCCAAAGGAGTGCAGACAAGAACAACTCTTGCATTTGCTCCTGAAACATTAGAGCTTGCAGATACTGGAGCGTCTTTTTCTTTCAAGATGGATTCATGCCCATCACAAAGAGCAACAACTGCTGAGAGCACAAAACTACACTCTTTGCATCTAAGTAATGAAGAAGGTGATAGTCACATATCTTGCCATCTAAATTTGACTCTGGCATCTTCTTCTTTACAAGTTAACAGAAATCCATACTCGGCTAGATCACCCCAAATAGACTGTCAGGAAATAGGTAAATTGGCGGAATCAAGATTTCAGGAAAACGATGAAGATTCCAACAGCGGAGTTCCTGCAACCAGAAATCCAACTCATGAGGTTGCCAATTTGGCTTCCTCGCAGTCAAAGGAGACTCCAAGCAGCAACCAAGCGCCACCAGCTGCTCCAGCCAGAGTAAACGATGTGTTCTGGGAACAGTTCCTTACTGAAAGACCAGGTTGTTCAGACAATGAAGAGGCAATATCCAACTACAGAGCAAATCCATGCGAGGAGCAAGACGAAGGGCGATCAATTCCTGGAATCTCCAGAAATGTTAAGAATATGGATCGGCTCACACTTTGA 1464 0.4419 MDGGAPLSSAGSGGTGGPAPFLIKTYEMVDDSTTDDIVSWSPTNNSFVVWNHPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFANDDFVKDQKHLLKNIHRRKPIHSHSNPPGSGVDPERAAFEDEIEKLTREKSALESNIIRFKQQAAVKLQLEDLLQRLDGVEKKQKNLLNFFEKYLQNPCFVEHLSRKLDCMDLSAYNKKRRLPQVDHSAPVGESNLVENHGNFRTEFGTVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGENPQKRPSEETPKGVQTRTTLAFAPETLELADTGASFSFKMDSCPSQRATTAESTKLHSLHLSNEEGDSHISCHLNLTLASSSLQVNRNPYSARSPQIDCQEIGKLAESRFQENDEDSNSGVPATRNPTHEVANLASSQSKETPSSNQAPPAAPARVNDVFWEQFLTERPGCSDNEEAISNYRANPCEEQDEGRSIPGISRNVKNMDRLTL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02447 487 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 323 IPR027725 -
Accr8g02447 487 Gene3D - 16 111 IPR036388 -
Accr8g02447 487 ProSitePatterns HSF-type DNA-binding domain signature. 60 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g02447 487 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g02447 487 MobiDBLite consensus disorder prediction 409 429 - -
Accr8g02447 487 Coils Coil 128 175 - -
Accr8g02447 487 MobiDBLite consensus disorder prediction 459 487 - -
Accr8g02447 487 FunFam Heat shock transcription factor 1 14 111 - -
Accr8g02447 487 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g02447 487 MobiDBLite consensus disorder prediction 409 428 - -
Accr8g02447 487 SUPERFAMILY "Winged helix" DNA-binding domain 17 110 IPR036390 -
Accr8g02447 487 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g02447 487 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g02447 487 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr8g02447 487 MobiDBLite consensus disorder prediction 263 301 - -
Accr8g02447 487 MobiDBLite consensus disorder prediction 108 127 - -
Accr8g02447 487 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02447 Accr-Chr8 48136968 48144562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02447 21 487 HSF AT4G13980 53.700 3.94e-166 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr8g02447 HSF_DNA-bind 3.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02447 K09419 - gmx:100786408 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02447 8 48136968 48144562 Accr8g02447 8 48136968 48144562 ECH