Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02435 ATGGCTCACCCCAAACTGAAAACCCTAGTTTCTCTCTCTATACTCATTTTCTCTCTCCTCTCCTTCGCCATAGCCGATGATGCAGCTTTCATGACTAAGCTGGCCAAAGCCCTCTCTAATCCCTCTGGCTGGTCTGGCAACACCCCTTTCTGCAAATGGGACGGCGTCAATTGCGACAGCTCCGGCCGCGTCACCTCTATCAACCTTGCTTCCAAATCTCTTTCTGGCACTCTTCCTTCTGATCTTAAGTCTCTCTCACAGCTAACTTCCCTTTCTCTTCAGAACAATGCTCTCGCCGGTCCTTTGCCGTCTCTGGCTAATCTCTCTTCGCTTAAAACTGTTTTCCTTGACTTCAACAATTTCACCTCCATCCCGGACGGTTGCTTCCAAGGGCTCACCAGCTTACAGAACCTCAGCTTGAGCAACAACGCCGCCCTTGCACCCTGGACGCTGCCTACCGACCTGACCCAGTCTACGAATCTGGTGACTCTTGATCTCGGAACGTCTAATCTAGTGGGCTCTTTGCCAGATATTTTTGGTTCTTTACCGAGCTTGCAGAGTGTGCGTCTTTCTTACAACAACCTCACTGGTGGGTTGCCTGCCTCGTTTAATGGATCGGGAATCGCAAGGTTATGGCTTAACAATCAACAAACTGGGTTATCCGGTCCAATCGACGTGTTATCATCAATGACCCAGTTGTCTCAGGTTTGGCTTCAGAAGAACCAGTTCACAGGTCCCATTCCCGACTTGTCCAATTGCAAGAGTTTGTTCGATTTGCAGCTTCGGGACAATCAGTTAACTGGTATAGTCCCACCTTCTTTGATGACTCTCTCGAGCTTGCAGAACGTTTCTCTGGACAATGATAAGCTGCAGGGCCCGATGCCTGAGTTTAAAAGTGGTGTGAAGGCTAGTCTTGATGGGAATAGCTTTTGTAAAAGTACTCCGGGATCTTGTGATGATCGTGTCACAACCTTGCTTGCGATCGCTGTAGCTTTTGGGTATCCGGTTAAGTTGGCAGATTCATGGACCGGCAATGACCCCTGCAGTGATTGGAGTTTCATCGTGTGTACAGGTGGAAAGATCACCACGGTGAATATGCCGAAGCAGAATTTTGGGGGAACAATCTCACCTGCATTTGCGAATTTAACGGATTTAAAGAACTTGTATCTGAGTGGCAATAATTTGTCTGGTTCAATACCAGAGAGCTTGACAACTTTGCCTCAACTTGAGATTCTTGATGTATCTAACAACAATCTATCTGGAAAGGTTCCTAACTTCTCACCAAAGGTGAAGCTGACATATACTGGTAATCTTTTGCTAGGCAAAACTACTGGTTCCGGAGGAGAAAATGGAGCTAGTCCTACCACAGGTTCTGGTGATATTTCACCAGCTGGAAGCCCATCTCTAAAGGGAACCAGCACTTCATTGTCAGCTGGTTGGATTGCAGGTATAGTCATTATTGTCCTATTCTTTGTGGCGGTGGTGTTGTTTGTCTCCTGTAAATGTTATGCTAAACATCGTCATCAGAAATTTGGAAGGGTTAGCAATCCTGAAACGGGTAAGGGAGCTGTTAAAATTGATGTATTGGGTGCTCCCAATGGTTATGCTGGAGTTGCAAGCGATTTACATAGTCAGAGCAGTGGTGACCGTAGTGACCTTCATGTTTTTGACGGCGGCAGTGCTACAATTTCAATTCAAGTTCTTCGGCAAGTAACGAATAATTTCAGTGAAGATAACATTTTGGGCAGGGGAGGATTTGGAGTTGTTTACAAAGGGGAATTGCATGATGGAACAAAAATTGCCGTGAAGAGGATGGAATCTGTTGCAATGGGAAACAAAGGATTGAATGAATTCCAAGCAGAGATTGCAGTCCTTAGTAAAGTCAGGCACAGGCATTTGGTTGCTCTTTTAGGATATTGCATTAATGGCAATGAAAGGCTCTTAGTTTATGAGTACATGCCGCAAGGCACGTTAACGCAACATCTTTTTGAATGGGGTGAGAAGGGGTGCGCACCTCTAACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTGGCAAGGGGAGTGGAATATTTGCATAGCTTAGCTCAACAAAGTTTTATTCACAGGGACTTGAAGCCTTCAAACATACTTCTAGGTGATGACATGAGAGCGAAGGTTGCAGATTTTGGATTGGTTAAAAATGCACCTGATGGGAAGTATTCTGTTGAGACACGTTTGGCTGGAACTTTCGGGTATCTTGCACCTGAATATGCAGCTACTGGAAGAGTGACAACGAAAGTGGATGTTTATGCATTTGGGGTTGTTTTGATGGAATTGATCACTGGCAGAAAGTCATTGGACGACACTGTCCCAGATGAAAGGTCTCACTTGGTGTCATGGTTCCGTAGGGTTCTAATTAACAAAGAGAACATCCCCAAGGCTATTGATCAAACATTAGACCCTGACGAGGAGACAATGGAGAGCATATATAAGGTGGCCGAGCTTGCAGGGCACTGCACTGCTCGCGAGCCATACCAAAGGCCAGACATGGGCCATGCAGTGAATGTGTTGGTTCCTCTTGTAGAGCAGTGGAAACCACATAACCACGAAGAAGAAGAAAGTTATGGAATTGACCTTCACATGAGCCTACCTCAAGCTCTGCAAAGATGGCAAGCCAACGAAGGCACTTCTGCAATGTTTAATGACGTGTCCCTCTCACAAACCCAGTCCAGCATCCCCTCTAAGCCTTTGGGATTTGCAGACTCCTTCGGCTCAATGGATTGCAGGTGA 2772 0.4607 MAHPKLKTLVSLSILIFSLLSFAIADDAAFMTKLAKALSNPSGWSGNTPFCKWDGVNCDSSGRVTSINLASKSLSGTLPSDLKSLSQLTSLSLQNNALAGPLPSLANLSSLKTVFLDFNNFTSIPDGCFQGLTSLQNLSLSNNAALAPWTLPTDLTQSTNLVTLDLGTSNLVGSLPDIFGSLPSLQSVRLSYNNLTGGLPASFNGSGIARLWLNNQQTGLSGPIDVLSSMTQLSQVWLQKNQFTGPIPDLSNCKSLFDLQLRDNQLTGIVPPSLMTLSSLQNVSLDNDKLQGPMPEFKSGVKASLDGNSFCKSTPGSCDDRVTTLLAIAVAFGYPVKLADSWTGNDPCSDWSFIVCTGGKITTVNMPKQNFGGTISPAFANLTDLKNLYLSGNNLSGSIPESLTTLPQLEILDVSNNNLSGKVPNFSPKVKLTYTGNLLLGKTTGSGGENGASPTTGSGDISPAGSPSLKGTSTSLSAGWIAGIVIIVLFFVAVVLFVSCKCYAKHRHQKFGRVSNPETGKGAVKIDVLGAPNGYAGVASDLHSQSSGDRSDLHVFDGGSATISIQVLRQVTNNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGNKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWGEKGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKSLDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPHNHEEEESYGIDLHMSLPQALQRWQANEGTSAMFNDVSLSQTQSSIPSKPLGFADSFGSMDCR 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02435 923 PANTHER OSJNBA0070M12.3 PROTEIN 10 923 - -
Accr8g02435 923 ProSiteProfiles Protein kinase domain profile. 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02435 923 FunFam receptor protein kinase TMK1 653 870 - -
Accr8g02435 923 SUPERFAMILY L domain-like 41 298 - -
Accr8g02435 923 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
Accr8g02435 923 Pfam Leucine rich repeat N-terminal domain 322 356 IPR013210 -
Accr8g02435 923 MobiDBLite consensus disorder prediction 445 468 - -
Accr8g02435 923 SMART serkin_6 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02435 923 Gene3D Ribonuclease Inhibitor 25 318 IPR032675 -
Accr8g02435 923 Pfam Protein tyrosine and serine/threonine kinase 578 849 IPR001245 GO:0004672|GO:0006468
Accr8g02435 923 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Accr8g02435 923 Gene3D Ribonuclease Inhibitor 319 443 IPR032675 -
Accr8g02435 923 Gene3D Phosphorylase Kinase; domain 1 537 652 - -
Accr8g02435 923 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Accr8g02435 923 Pfam Leucine rich repeat 378 419 IPR001611 GO:0005515
Accr8g02435 923 Pfam Leucine rich repeat 110 143 IPR001611 GO:0005515
Accr8g02435 923 SUPERFAMILY Protein kinase-like (PK-like) 552 851 IPR011009 -
Accr8g02435 923 CDD STKc_IRAK 581 854 - -
Accr8g02435 923 FunFam Receptor-like kinase TMK4 25 316 - -
Accr8g02435 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Accr8g02435 923 Gene3D Transferase(Phosphotransferase) domain 1 653 876 - -
Accr8g02435 923 FunFam receptor protein kinase TMK1 537 652 - -
Accr8g02435 923 SMART LRR_typ_2 132 158 IPR003591 -
Accr8g02435 923 SMART LRR_typ_2 182 205 IPR003591 -
Accr8g02435 923 SMART LRR_typ_2 108 131 IPR003591 -
Accr8g02435 923 SMART LRR_typ_2 382 405 IPR003591 -
Accr8g02435 923 SMART LRR_typ_2 406 428 IPR003591 -
Accr8g02435 923 SUPERFAMILY L domain-like 317 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02435 Accr-Chr8 47976715 47980227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02435 64 851 Receptor kinase-like Gene Family AT5G07280 33.414 1.59e-96 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Accr8g02435 PK_Tyr_Ser-Thr 8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02435 K00924 - gmx:100781851 1392.87