Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02419 ATGGATGATGACTTTGAGTTCCCCACTGCGGCCAACATGGGCAACAAAGACGAAGATATGGGGATTCCAGAGGATGACTCTGTTAGCCCAATTCTCAAGGTCGGAGAGGAGAAGGGGATAGGAGAGAATGGCCTGAAGAAGAAGTTGGTTAAGGAGGGGCGAGGATGGGAGACTCCGAAAGCTGGAGACGAGGTGGAAGTTCACTACACCGGGACATTGTTGGATGGAACTCAGTTTGATTCTAGCCGTGAGAGAGGAACCCCATTTAAGTTCAAACTTGGGCAAGGGCATGTAATCAAGGGATGGGATGAAGGCATCAAAACCATGAAGCTAGGTGAAAATGCCATTTTCACAATACCTCCAGAGTTGGCTTATGGAGAGTCTGGATCACCTCCGACTATTCCCCCCAATGCAACCCTCCAATTTGATGTGGAGTTGCTGTCTTGGACCAGTGTGGAGGACATAACCAGGGATGGGGGTATCTTGAAAAAAATCCTCTCCGAAGGAGAGAGTTGGGAAAAACCCAATGATCTAGATGAAGTCTCTGTTAAGTATGAAGCCAGGCTCGATAATGGGACCGTCATTTCTAAATCTGATGGTGTGGTGTTTACCGTGGAAGATGGCTATTTTTGTCCTGCTTTGGCTAAGGCTGTCAAAACAATGAAGAAAGGAGAGAAAGTCCTTTTGACTGTGAAGCCACGATATGCATTTGGCAAGAATGGGAGGCCAGCGTCTAGTGACGAAGGTGCTGTACCTCCTGATTCATCACTCCAAATTGATCTTGAATTGATATCTTGGAAGACCGTAACTGACATTACTAGGGATAAGAAAGTTGTGAAAAAGACTTTGAAGGAAGGGGAGAAATATGAACGACCAAATGATGGATCTGTTGTCCAAGTGAGACTTATTGGCAAGCTGCAAGATGGGACTGTCTTCACCAAGAAGGGTTATGATGAGGAGCAACCATTCGAGTTCAAAGTAGATGAAGGGCAAGTAATTGAGGGACTCGATGAAACCGTGAAGAACATGAAGAAAGGGGAAATTGCATTGGTGACCATACAACCTGAATATGCCTTTGGCGCCTCTGGTTCTCCCGAAGAATTTGCTCATGTTCCTCCTAATTCAACTGTATACTATGAAGTTGAGCTGATTTCAATTCAGAAGGAAAAGGAATCATGGGAGATGAACACAAAAGAGAAGATTGAGGTAGCTGGAAAGAAAAAGGAAGAAGGGAACGCATGCTTCAAGGCTGGTATATACGATAGAGCAACGAGGAGATACAAGAAGGCCATGAGGTTTATTGAGTTTGACTCCAGTTTTACTGATGAGGAGAAGCAGCAGACTAAGGCACTGAAAATCTCAATCAACCTCAATAATGCTGCCTGCATGCTGAAGCTTAAAGACCACAAGGAAGCAGTGAAGTGGTGCACAAAGGTATTAGAGCTTGATGGTGGGAATGTGAAAGCTCTGTACCGGAGGGCACAAGCATATATTCAACTTGCGGATCTGGACCTTGCTGAAATGGACATCAAGAAGGCCCTTGAAATAGAGCCAGACAATAGGGAGTTGAAAGTGGAGTACAAAATATTGAAGGAGAAAATGAGAGAATACAACAAGAAGGAAGCACAGTTCTATGGCAGCATATTTGCGAAAATGAACAAGCTTGAACAAACTAGAGGAGCAAATGCAGCAGCAAAAGCCCAGCACGTGCCTATGACTGTCGATGGCAAAGCATGA 1737 0.4491 MDDDFEFPTAANMGNKDEDMGIPEDDSVSPILKVGEEKGIGENGLKKKLVKEGRGWETPKAGDEVEVHYTGTLLDGTQFDSSRERGTPFKFKLGQGHVIKGWDEGIKTMKLGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVEDITRDGGILKKILSEGESWEKPNDLDEVSVKYEARLDNGTVISKSDGVVFTVEDGYFCPALAKAVKTMKKGEKVLLTVKPRYAFGKNGRPASSDEGAVPPDSSLQIDLELISWKTVTDITRDKKVVKKTLKEGEKYERPNDGSVVQVRLIGKLQDGTVFTKKGYDEEQPFEFKVDEGQVIEGLDETVKNMKKGEIALVTIQPEYAFGASGSPEEFAHVPPNSTVYYEVELISIQKEKESWEMNTKEKIEVAGKKKEEGNACFKAGIYDRATRRYKKAMRFIEFDSSFTDEEKQQTKALKISINLNNAACMLKLKDHKEAVKWCTKVLELDGGNVKALYRRAQAYIQLADLDLAEMDIKKALEIEPDNRELKVEYKILKEKMREYNKKEAQFYGSIFAKMNKLEQTRGANAAAKAQHVPMTVDGKA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02419 578 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Accr8g02419 578 FunFam Peptidylprolyl isomerase 35 153 - -
Accr8g02419 578 Gene3D - 39 153 IPR046357 GO:0003755
Accr8g02419 578 SUPERFAMILY FKBP-like 152 270 - -
Accr8g02419 578 MobiDBLite consensus disorder prediction 1 27 - -
Accr8g02419 578 Pfam Tetratricopeptide repeat 488 520 IPR019734 GO:0005515
Accr8g02419 578 Gene3D - 154 267 IPR046357 GO:0003755
Accr8g02419 578 FunFam Peptidylprolyl isomerase 154 267 - -
Accr8g02419 578 PANTHER PEPTIDYLPROLYL ISOMERASE 22 150 - -
Accr8g02419 578 SMART tpr_5 453 486 IPR019734 GO:0005515
Accr8g02419 578 SMART tpr_5 404 437 IPR019734 GO:0005515
Accr8g02419 578 SMART tpr_5 487 520 IPR019734 GO:0005515
Accr8g02419 578 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Accr8g02419 578 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 150 IPR001179 GO:0003755
Accr8g02419 578 SUPERFAMILY FKBP-like 271 404 - -
Accr8g02419 578 Gene3D - 268 389 IPR046357 GO:0003755
Accr8g02419 578 SUPERFAMILY TPR-like 392 552 IPR011990 GO:0005515
Accr8g02419 578 SUPERFAMILY FKBP-like 13 148 - -
Accr8g02419 578 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 178 267 IPR001179 GO:0003755
Accr8g02419 578 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 384 IPR001179 GO:0003755
Accr8g02419 578 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 56 147 IPR001179 GO:0003755
Accr8g02419 578 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 264 IPR001179 GO:0003755
Accr8g02419 578 Gene3D Tetratricopeptide repeat domain 390 547 IPR011990 GO:0005515
Accr8g02419 578 FunFam Peptidylprolyl isomerase 392 547 - -
Accr8g02419 578 Coils Coil 520 540 - -
Accr8g02419 578 FunFam Peptidylprolyl isomerase 268 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02419 Accr-Chr8 47835306 47838270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02419 22 578 Calmodulin-binding Proteins AT5G48570 68.683 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02419 K09571 - qsa:O6P43_023604 934.48