Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02408 ATGATGTTGAAATCTGTTAAGGAAAGCCTTAAGAGCCTTGGATCAAAGTGTGTGCAGAAGAAGATGGATCAATCAGTGAATGGTGTTCAGTGCTCAAACTGCAACGAAGTTTGCTTAGAGCTCAGCAACAACGACCAATACTGTGAACGTGAGGATGGAAACAAAACAGCTGATGAGGCTGAACCCAATAGTTCTTTTGCTCATTCTGTCATCAATATGGTTGGCATGCTCACAGGATTGGGGCAATTATCAGCGGCATATGCAGTAGAAGAGGGAGGGTGGGCATGTGCGATAATATTCCTCTTAGGCCTTGCAATCACGTGTGCTTATAGCTGTCGTCTTCTTGGAAAATGCATGACCAAAAACCCTAAGCTCCAAAGCTACGCAGATATAGGTGAACAAGCCTTTGGGAAAAAAGGAAGAATAGTTGCATCAACCCTAATCTACGCAGAGATCTTTATGGCCCTTGTCTCCTACACCATCTCACTACACGATAACTTGTTCACTGTCTTCATGGGATCTCATCACCTTAACCATTTGCGTCTTCCTAAGTTACTGTCACCTTCTCAGCTTCTCACTGTTCTTGCTGTTCTTATTGCTTTGCCTAGCTTGTGGCTCACAGACCTTTCTTCCATTTCTTTTCTTTCCTCTGCTGGTGTTCTCATGTCTCTTGTTATTTTCTTGTCTGTCGCTGTCACGCCCATTTTCGGTGGCGTAAAGGTTAACCGACACATCCCAGTTCTTCAGATCCATAATGTCCCTTCTGTTTCTGGCCTCTTCATTTACGGCTTTGGCGGACACGTCGTGTTCCCTAATCTCCATAAATCCATGAAGGACCCCTCCAAGTTCACCAAGGTGATAATAGTGAGCTTCTCAATAGCCACGCTATTGTTTACAGCGCTGGGATTCATGGGAGCAAAGATGTTTGGGCCACAAGTAAAGTCACAGATCACTCTAAGCATGCCAGAGAATTTCATAGTAACCAAGATAGCAGTGTGGGCGACAGTGATAACACCAATGACCAAATATGCTCTTGAGTTCGCACCATTTGCAATTCAGCTACAGCAAAGGCTTCCCAATTCTATGAGTCACAGAAGCAAGATGGTGATAAGAGGCACGGTGGGTTCAGTGCTGCTACTAGTGATTCTAGCATTAGCTCTTTCTGTGCCTTATTTTGAGGACGTGCTTAGTCTCACAGGGTCGCTTTTGACAGTTTTCATAAGCTTGATATTTCCTTGTGCTTTCTACGTTAAGATCTGTTGGGGACAAATATCAAACACTCTCTTAGTATTTAACTTCTGTCTCATAGCTTTAGGGCTGGTCCTTGGAGTTATGGGCGCCATTTCTTCCTCCACCTCACTCCTCAACAATCTTAACGCTCATCGCTGA 1389 0.4435 MMLKSVKESLKSLGSKCVQKKMDQSVNGVQCSNCNEVCLELSNNDQYCEREDGNKTADEAEPNSSFAHSVINMVGMLTGLGQLSAAYAVEEGGWACAIIFLLGLAITCAYSCRLLGKCMTKNPKLQSYADIGEQAFGKKGRIVASTLIYAEIFMALVSYTISLHDNLFTVFMGSHHLNHLRLPKLLSPSQLLTVLAVLIALPSLWLTDLSSISFLSSAGVLMSLVIFLSVAVTPIFGGVKVNRHIPVLQIHNVPSVSGLFIYGFGGHVVFPNLHKSMKDPSKFTKVIIVSFSIATLLFTALGFMGAKMFGPQVKSQITLSMPENFIVTKIAVWATVITPMTKYALEFAPFAIQLQQRLPNSMSHRSKMVIRGTVGSVLLLVILALALSVPYFEDVLSLTGSLLTVFISLIFPCAFYVKICWGQISNTLLVFNFCLIALGLVLGVMGAISSSTSLLNNLNAHR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02408 462 PANTHER AMINO ACID TRANSPORTER 55 442 - -
Accr8g02408 462 Pfam Transmembrane amino acid transporter protein 63 448 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02408 Accr-Chr8 47682503 47685751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02408 38 458 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.447 3.81e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02408 - - gmx:100790897 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02408 8 47682503 47685751 Accr8g02408 8 47682503 47685751 ECH