Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02395 ATGACACAGGCTTTAGCCACTGCTTTGCTGCTGAAGGAGAAGGAAGAGGCAGCGGTTACAGCAAACCGGTTAGAGGCTGCCGATACCGTGGTGGACGTTGGGGGCTCAGACTGTTTGGTCGGTCTAGAATGCTTTCTGAACATTGTCAGGGCACTGGGAATGGGATCATGCCTCTCTGTGGCCCATCCCCTCCCTTATTCGCCAGAATCCACTTCAGAAAGTGCGAAGCGAAGGAGGAGATTAAAGAGCAGCTCTTCGTTTGATTATAAAACGGAATCGGCCCTACATAAAATCCCTGGGAGGATGTTCGTAAATGGATCCAGTGAGGTCGCGTCCCTGTTTTGTAAGCAAGGCAAAAAAGGGATCAACCAGGACGCCATGCTTGTTTGGGAGAACTTCTGTACAAAGGACACCATTTTTTGTGGAGTTTTCGATGGCCATGGTCCTAGTGGTCATAGGGTAGCAAAGAGAGTCAGGGATTCCTTCCCTTTAAAGCTTATTGCCCAATGGGAATTGCATCATAACAATAAGGATGGACTGAGTGATAACAGAAATCCTATGGCGAACCATAAATCAGAGGATATTGGACTTAGAATGGTTGGTGAGAAATCTAGTCTTACTGATCAAGAGCACAACTGTACTAATACTATGAAGGCGCTGAAGGAATCTCTTCTGAAAGCTTGCAAGATTATGGACAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACAACTGCAGTCGCCTTGGTCAAACAGGGGCAAGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCTATATTGGGTACTAAGGATCATGATGATTCTCTTATTGCTGTTCAGTTGACCATTGACTTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAAGCGGTGTAGAGGACGTGTATTTGCTCTTCGCAATGAACCTGAGGTTGCTCGAGTTTGGCTGCCCAATGCTGACTCCCCAGGCCTTGCTATGGCACGAGCTTTTGGAGATTTTATTCTTAAAGACTTTGGTCTGATATCTGTTCCTGATGTCTCCCATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCCACAGATGGGATTTGGGATGTTTTATCGAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCTTCCGCGGCTCGAACACTTGTTGAGACCGCTGTTCGAGCATGGAGGACAAAGTACCCGACTTCAAAAATTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACTTCAAGACAGTTTACTCCACACACAAGGAGACGCCCGAGGCTTCGACTAACCACCAATCTGAGGGATCTGCTCCTGAAACTGGAGTTAACTGTTCAGATAAGTCCATTGCTTCCCCTGAGAATTTTCCTATGCTTGGGAAGAAAGGAGATGGAGTAGAAGCTGTACAGCAGTAG 1458 0.4588 MTQALATALLLKEKEEAAVTANRLEAADTVVDVGGSDCLVGLECFLNIVRALGMGSCLSVAHPLPYSPESTSESAKRRRRLKSSSSFDYKTESALHKIPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWENFCTKDTIFCGVFDGHGPSGHRVAKRVRDSFPLKLIAQWELHHNNKDGLSDNRNPMANHKSEDIGLRMVGEKSSLTDQEHNCTNTMKALKESLLKACKIMDKELKLHPDIDCFCSGTTAVALVKQGQDLVIGNVGDSRAILGTKDHDDSLIAVQLTIDLKPNLPREEERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRAWRTKYPTSKIDDCAVVCLFFDSDSDFKTVYSTHKETPEASTNHQSEGSAPETGVNCSDKSIASPENFPMLGKKGDGVEAVQQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02395 485 SMART PP2C_4 104 421 IPR001932 -
Accr8g02395 485 MobiDBLite consensus disorder prediction 65 84 - -
Accr8g02395 485 MobiDBLite consensus disorder prediction 438 465 - -
Accr8g02395 485 CDD PP2Cc 110 423 IPR001932 -
Accr8g02395 485 PANTHER PROTEIN PHOSPHATASE 85 421 IPR015655 GO:0004722|GO:0006470
Accr8g02395 485 ProSiteProfiles PPM-type phosphatase domain profile. 110 423 IPR001932 -
Accr8g02395 485 Gene3D - 105 425 IPR036457 -
Accr8g02395 485 MobiDBLite consensus disorder prediction 438 485 - -
Accr8g02395 485 SUPERFAMILY PP2C-like 110 424 IPR036457 -
Accr8g02395 485 Pfam Protein phosphatase 2C 207 406 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02395 Accr-Chr8 47577319 47579910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02395 54 425 PP2C-type Phosphatase Gene Family AT3G02750 56.977 7.69e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02395 - - gmx:100802479 609.372