Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02386 ATGTACCCTTCTTCGTCGTCCTCCTCCTCCCTGTCCCAGAGCGGCTTAACCCGCTACGGTTCCGCCCCGGGCTCATTCCTTACCAACGCCGTCGATGCCGTTATCGGAGGAGCTGACCGCGAATTCTCCACCACCGCCGCCGGATCACGCCCTCCGGTCACCCATTTCTTCCCCGGCGAATCCTCCGAGTCCTCCTGCAAGGTCAACAGCCAATCTTCCGATCCAAAAGACCAGCAGCCTCCCAGGCTCGGTTTGCAGAGATCGTACGGTCTTCCTCCTGACGGAGCCGCCATCGGCTTCGGCATCTCCTCTTCGGCTTTGCTTCGTCAGAGAAGCTCGCCAGCTGGCTTCCTCAGCCATCTCACTACTACACCACCTGATAATGGAGGTTTTTCAATTTCAAGGGGCAGTGGAAGCTATAGCGCACAAGGCGCCTCCAATAGCGGCCATGGGATAGCAAGGCTAAAATCTCAATTGAGCTTCACTGGGCAAGAATCTCTTTCACAGATATCGGAGGTGAGTGAACACGTTGATGGCATCAATTCTGACAATGGCCACCATAGAACTACACATTCTTATGCCACAACCAGCTTTGGAATGGACACCTGGGATGGTTCAAACTCCATTGTGTTTTCTGCTCCCTCTAGTAAACGCGCTAAGACTATAGATGGAGACATTATGAACTGCATCAATGCCTTGGAATCTCAGTTTAGTCTGCCACAAACAACTCTGGAAATGGCAACAGTGGAGAAGCTACTTCATCATATTCCTGAAGATTCTGTCCCTTGTAAAATTCGTGCTAAGCGAGGCTGTGCTACTCATCCAAGAAGCATTGCGGAACGGGAGAGAAGAACCAGAATTAGTGGGAAGCTGAAGAAGTTGCAAGACCTGGTGCCTAATATGGATAAGCAAACAAGCTATGCGGACATGCTGGATTTGGCTGTTCAACATATCAAAGGTCTACAAACTCAAGTTCAGAAGCTCCACAAAGAACTCGACAATTGCACCTGTGGATGCAAACAAAGCTCATAG 1032 0.5058 MYPSSSSSSSLSQSGLTRYGSAPGSFLTNAVDAVIGGADREFSTTAAGSRPPVTHFFPGESSESSCKVNSQSSDPKDQQPPRLGLQRSYGLPPDGAAIGFGISSSALLRQRSSPAGFLSHLTTTPPDNGGFSISRGSGSYSAQGASNSGHGIARLKSQLSFTGQESLSQISEVSEHVDGINSDNGHHRTTHSYATTSFGMDTWDGSNSIVFSAPSSKRAKTIDGDIMNCINALESQFSLPQTTLEMATVEKLLHHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHKELDNCTCGCKQSS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02386 343 MobiDBLite consensus disorder prediction 43 90 - -
Accr8g02386 343 SMART finulus 277 327 IPR011598 GO:0046983
Accr8g02386 343 Gene3D - 272 341 IPR036638 GO:0046983
Accr8g02386 343 CDD bHLH_AtbHLH_like 276 328 IPR045239 -
Accr8g02386 343 Pfam Helix-loop-helix DNA-binding domain 276 322 IPR011598 GO:0046983
Accr8g02386 343 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 23 333 - -
Accr8g02386 343 FunFam Transcription factor bHLH130 family 272 341 - -
Accr8g02386 343 MobiDBLite consensus disorder prediction 58 79 - -
Accr8g02386 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 271 321 IPR011598 GO:0046983
Accr8g02386 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 274 335 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02386 Accr-Chr8 47483280 47488946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02386 15 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 49.721 4.59e-93 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr8g02386 HLH 5.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02386 - - qsa:O6P43_023660 472.241