Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02382 ATGTCTCAGTCAGATGAATCGCCTGTTTTTAGCAAACCCAGATTGGTACTCAAGAAGGTGCTTGCCAGAAATGTAAATCATGGAAGTCGTCTAATGGTGAACAAGAACATTGCAAGTGAGTTCAAGGGTTTGGATCCTTTTCTGAATCTGGATCACTTTTCAGTGACTCACCCTGTAGGATTCACTGATCATCCACATAGAGGGTTTGAGACCGTCACCTATATGCTAGAGGGAGGATTAGTTCATCAAGATTTTATTGGCAATAAAGGAACAATAAGAGCTGGTGAGGTTCAATGGATGTCTGCAGGCAGAGGGATCATTCACTCTGAGATGCCTGCAGGGGTGGGTACACACACAGGAGTGCAACTATGGATCAATCTTTCCAAGAAAGACAAAATGATAGAACCAAGCTATCAAGATCTGCTGAAGGAAAACATTCCAAGAGCAGCGAAAGATGGGGTTGAAGTAAAAGTGATAGCAGGTGAAGCATTAGGGGTTAAATCAGAGACGCACACAAGGACTCCAGCCATGTTTTTTGATTTCAAGCTGCACCCACAAGCCCAAGTGCACCACAACATTCCAGAGACTTGGAATTCCTTTGTGTATGTGCTTGAAGGAGAAGGAGTGTTTGGGTCCCCAAGTTCATCACCAATTGGACCTTCCAATGTGGTGTTCTTGGGGCTTGGAGATGGTGTGAGTGTGTGGAACAAATCTTCTGAGCCTCTGAGGTTTCTGCTCATAGCCGGCGAGCCATTGAACGAGCCAGTGGCTAAGTATGGTCCTTTTGTGATGAGCACGCAGTCTGAGATTGAGCAGGCCATGGAGGATTTTCAATACTGTAAGAATGGTTTTGAGAATGGCAGACATTGGAGGTCTCAGTGA 882 0.4524 MSQSDESPVFSKPRLVLKKVLARNVNHGSRLMVNKNIASEFKGLDPFLNLDHFSVTHPVGFTDHPHRGFETVTYMLEGGLVHQDFIGNKGTIRAGEVQWMSAGRGIIHSEMPAGVGTHTGVQLWINLSKKDKMIEPSYQDLLKENIPRAAKDGVEVKVIAGEALGVKSETHTRTPAMFFDFKLHPQAQVHHNIPETWNSFVYVLEGEGVFGSPSSSPIGPSNVVFLGLGDGVSVWNKSSEPLRFLLIAGEPLNEPVAKYGPFVMSTQSEIEQAMEDFQYCKNGFENGRHWRSQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02382 293 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Accr8g02382 293 CDD cupin_pirin_N 40 127 - -
Accr8g02382 293 Pfam Pirin 39 125 IPR003829 -
Accr8g02382 293 CDD cupin_pirin_C 175 251 - -
Accr8g02382 293 PANTHER PIRIN-RELATED 1 293 IPR012093 -
Accr8g02382 293 PIRSF Pirin 12 291 IPR012093 -
Accr8g02382 293 Gene3D Jelly Rolls 147 252 IPR014710 -
Accr8g02382 293 SUPERFAMILY RmlC-like cupins 39 291 IPR011051 -
Accr8g02382 293 Gene3D Jelly Rolls 39 278 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02382 Accr-Chr8 47460958 47462658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02382 11 288 Calmodulin-binding Proteins AT3G59220 56.584 8.02e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02382 K06911 - zju:125423505 409.838