Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02380 ATGTTATTGTCAGAATCACCAAGATTGGTTGTGAAGAAGGTTTTAGCCAAATGTCTCCAGGAATCCCCTGGAGTTATCATCAGAGGCTTTACTGGAAGAGAGCTGGAATGTGATCCATTTGTGATGCTGATTCACTTCTCAGTGACTCCACCGGGAGGATTTCCCGATCACCCCCACAGAGGTTTCGAGGCTCTCACCTACGTGCTGCAGGGAGCCATAAGGTATGAAGATTTCGGTGAACACAAGGGCACTTTAAGAACCGGTGACGTTCAGTGGATGAGGGCGGGGAGAGGAATGGTTCACTCAGAAATGCCCGCAGAAGAAGGAACTCACACCGGACTTCAACTCTGGATCAATTTGCCTTCCCAACATAAAATGATTGAACCTGGGTGCCAAGAGGTTGTAAGCAAGGAGATACCAAGAGTGGAGAGAGATGGAGCAGAAATTACGGTTTTAGCCGGAGAAGCGTTAGGGGTGAAAGCTCCGGTGCACAGTAAGACGCCGGTTATGTTGGTGGACGTGACACTGAAGCCAAATTCACAAGTACATTTGAGAACCCCTGAGTTGGGGTGGAACTACTTGGTGTATGTGATCGAGGGAGAAGCGGTGGTGGGGAGTGGGTCGGCGGAGACAATAACGGCGGAGGAGGCGGCGGTGCTAGGGGGAGGAGATGGGGTCAGCGTGTGGAACAAGTCGGAGAAAAAGCCGGTGAGAATGGTGGTGTTAGGTGGAGAGGCGGTGAAGGAAAAGGTGGCTCAGAGGGGACCATTTGTGATGAACACAGAATCAGAGATAGAGGAGGCCATGGACGATTATCGTATGTTTAAGAATGGCTTCCAGATGGCTAGCTCTTGGAAATCTAATCCTATGAATAATGCCTGA 882 0.5023 MLLSESPRLVVKKVLAKCLQESPGVIIRGFTGRELECDPFVMLIHFSVTPPGGFPDHPHRGFEALTYVLQGAIRYEDFGEHKGTLRTGDVQWMRAGRGMVHSEMPAEEGTHTGLQLWINLPSQHKMIEPGCQEVVSKEIPRVERDGAEITVLAGEALGVKAPVHSKTPVMLVDVTLKPNSQVHLRTPELGWNYLVYVIEGEAVVGSGSAETITAEEAAVLGGGDGVSVWNKSEKKPVRMVVLGGEAVKEKVAQRGPFVMNTESEIEEAMDDYRMFKNGFQMASSWKSNPMNNA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02380 293 Gene3D Jelly Rolls 36 273 IPR014710 -
Accr8g02380 293 Gene3D Jelly Rolls 140 247 IPR014710 -
Accr8g02380 293 PIRSF Pirin 6 286 IPR012093 -
Accr8g02380 293 CDD cupin_pirin_N 38 121 - -
Accr8g02380 293 PANTHER PIRIN-RELATED 5 288 IPR012093 -
Accr8g02380 293 SUPERFAMILY RmlC-like cupins 36 288 IPR011051 -
Accr8g02380 293 Pfam Pirin C-terminal cupin domain 172 277 IPR008778 -
Accr8g02380 293 Pfam Pirin 37 118 IPR003829 -
Accr8g02380 293 CDD cupin_pirin_C 168 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02380 Accr-Chr8 47455265 47456822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02380 7 282 Calmodulin-binding Proteins AT3G59220 52.688 4.41e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02380 K06911 - mof:131150613 351.288