Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02365 ATGCAGCTCAAGCATCTCTGCATCATTTTACCTGCAGATTCTGCTGAGTTTAAGCAACACCCACCATCAAAAGTCAACCAATCTTCCCAGAAAGAAACCAAGACAGAGACAAAGAAACAACACAGGGCTTGTTGGGGTCAAGTTCTTGCCTTCTTTCGTGATTCTGTGAGCAAATTATATGGCACAAACTGTTCGAGGTTCTTCCACAATGAAGTGGGGAAAGGGAACCAAGGCTCAGTCACGCTGTTTCATGACATGGATGGAGTACAACTCTCTGCTAAAATTGGTGGGGACAGCCCAAGAATCTTCAGCTTTGCTGAGCTTTTCATAGGGTCTAATGGTTTCAGTGAGGATCATGTTCTGGGAAGTGGAGGATTTGGGAGAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACAGTGGTTGCTGTCAAATGTTGCTTAGCAGAGAAAGGCCAGCAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCCGTGGCTCATCTTCGACACAAGAACCTTGTCAGGCTCAGGGGTTGGTGTGTTCATGAAGATCAGTTGTACCTTGTCTATGATTACATGCCTAACCTCAGCCTTGACCGTATACTCTTTCGCCGGGCGGAGAGTCCAAACGCTGAGCCTCTTAGCTGGGGAAGGCGTGGGAAGATTATCAAAGGCTTGGCAGCTGCATTATACTATCTTCATGAGCAACTAGAGAATCAGATCATTCACAGGGATGTGAAAACCAGCAATGTGATGCTTGATTCCCAGTACAATGCCCGGTTGGGTGACTTTGGCTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATAATAATAATCAAAGTAGGAAAACATCAACCAAAATTGACCCTTTCAGGTTGGCTGAGACAACAAGAATTGGTGGCACAATTGGGTATTTGCCCCCCGAGAGTTTCCAGAAGAAAAGCATCGCTACCTCGAAATCTGATGTGTTCAGCTTCGGTATAGTTGTGCTGGAAGTGGCATCTGGAAGGAGAGCTATTGATCTTGCATACCCTGATGATAAGATCATTTTGCTTGACTTTGTTAGGAGGCTATCTGATGAAGGGAAGCTCCTAGCAGCAGGCGATTCTCGGCTGCCAGATGGCTCCTACAAGCTTTCTGATATGGAACATTTACTTCACGTAGGCCTTCTTTGTACACTCCATGAACCACAATCAAGGCCTAGCATGAAATGGATTGTAGAAGCACTTTCTAACATTTCAAGCCCATTACCAGCTCTTCCTTCTTTCCATTCCCACCCTTTATATATTACTTTATCTTCTCCATCTGATACAAGTCTAAGCAGCACAAATGCCTCCAACACAGAAAATGTCAGCATAATCACCAACTATTCTTCATCCAACTATGTTACAGCAAATGGGAGGACAATATACATGACTGCTGAAGATAGAAACAGCGGAATCTGCTCCGCAAAGTCCATGTATCACCACAACACATCATTTCCTGTGGTTGAAGCTCCGAGGGAGATATCATACAAGGAGCTTGCCATGGCTACAGATCATTTTTCTGAGTCTATGAAAGTAGCAGAGCTAGACTTTGGAACTGCTTACCATGGCATCCTTGGAGATCGTTGCCATGTAATGGTGAAACGCCTAGGAATGAAGACGTGCCCTGCGCTGCGCGAAAGATTCTCTAATGAACTGCGAAATCTAGCAAGGCTTCGCCACAGGAATTTGGTGCAGCTTCGAGGTTGGTGTACCGAGCAAGGGGAAATGCTTGTTGTGTATGATTACTCAGCAACAAGACTTCTCAGTCACCATCTTCTCCGTCATACCAACCCTAGAGATGGGAGTTCTGTCCTGAAATGGCATCACAGATACAATATAATAAAATCACTAGCTTCTGCCGTTCTTTACCTTCATGAGGAATGGGAAGAACATGTAATTCATAGGAACATCACTTCTTCAGCTGTTGTCCTTGAGCCTGATATGAACCCAAGACTCAGCAGTTTTGCCCTGGCTGAATTTTTGACCCGGAATGAGCATGGACATCATGTAGTCAAAGACACCAACAAATCGGTTCGAGGAATTTTCGGCTACATGTCACCTGAATATATAGAATCCGGCGAAGCTGCCTCTGCTGCTGATGTTTACAGTTTTGGTGTGGTGATGCTTGAAGTTATCAGTGGACAGATGGCAGTGGACTTCCGGCAGCCTGAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGAGACAAGAAAAAGACCACTGGAGAATTTAGCAGACATAAGGCTCAATGGAGAGTACAATCACCAAGAACTGATGAGATTGGTGAAGCTAGGAATTGCATGCACCCGGTCTGACCCAAAGTTAAGACCAAACATGAGACAAATAGTAAGCATCCTTGATGGAAATGACAGATTGATCATGGAAAAAAACCAGAAAGAGAGCACAGAAGACTGGAAAGAAAGGAATTCTTATTCATTGTCACTGATTAGGAGAATCCAAGCTCTAGGAATCCGTTGA 2505 0.4467 MQLKHLCIILPADSAEFKQHPPSKVNQSSQKETKTETKKQHRACWGQVLAFFRDSVSKLYGTNCSRFFHNEVGKGNQGSVTLFHDMDGVQLSAKIGGDSPRIFSFAELFIGSNGFSEDHVLGSGGFGRVYKAVLPSDGTVVAVKCCLAEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRAESPNAEPLSWGRRGKIIKGLAAALYYLHEQLENQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYNNNQSRKTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAAGDSRLPDGSYKLSDMEHLLHVGLLCTLHEPQSRPSMKWIVEALSNISSPLPALPSFHSHPLYITLSSPSDTSLSSTNASNTENVSIITNYSSSNYVTANGRTIYMTAEDRNSGICSAKSMYHHNTSFPVVEAPREISYKELAMATDHFSESMKVAELDFGTAYHGILGDRCHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSATRLLSHHLLRHTNPRDGSSVLKWHHRYNIIKSLASAVLYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFLTRNEHGHHVVKDTNKSVRGIFGYMSPEYIESGEAASAADVYSFGVVMLEVISGQMAVDFRQPEVLLVKKVHEFETRKRPLENLADIRLNGEYNHQELMRLVKLGIACTRSDPKLRPNMRQIVSILDGNDRLIMEKNQKESTEDWKERNSYSLSLIRRIQALGIR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02365 834 Gene3D Phosphorylase Kinase; domain 1 88 192 - -
Accr8g02365 834 ProSiteProfiles Protein kinase domain profile. 115 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02365 834 SMART serkin_6 115 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02365 834 FunFam Receptor like protein kinase S.2 193 416 - -
Accr8g02365 834 FunFam Receptor like protein kinase S.2 593 819 - -
Accr8g02365 834 SUPERFAMILY Protein kinase-like (PK-like) 489 795 IPR011009 -
Accr8g02365 834 PANTHER - 79 412 - -
Accr8g02365 834 Pfam Protein kinase domain 116 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02365 834 CDD STKc_IRAK 526 797 - -
Accr8g02365 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Accr8g02365 834 SUPERFAMILY Protein kinase-like (PK-like) 100 442 IPR011009 -
Accr8g02365 834 ProSiteProfiles Protein kinase domain profile. 515 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02365 834 Gene3D Transferase(Phosphotransferase) domain 1 596 821 - -
Accr8g02365 834 Gene3D Transferase(Phosphotransferase) domain 1 193 417 - -
Accr8g02365 834 MobiDBLite consensus disorder prediction 18 38 - -
Accr8g02365 834 FunFam Receptor like protein kinase S.2 89 192 - -
Accr8g02365 834 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Accr8g02365 834 Gene3D Phosphorylase Kinase; domain 1 478 591 - -
Accr8g02365 834 Pfam Protein tyrosine and serine/threonine kinase 523 795 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02365 Accr-Chr8 47272469 47274973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02365 496 796 Receptor kinase-like Gene Family AT5G55830 36.066 4.65e-51 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr8g02365 PK_Tyr_Ser-Thr 6.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02365 - - gmx:100796108 1210.28