LGRPv2

Gene search

Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr8g02360	430	CDD	HMG-box_AtHMGB9-like	253	319	-	-
	Accr8g02360	430	Coils	Coil	302	322	-	-
	Accr8g02360	430	SMART	ARID_2	32	122	-	-
	Accr8g02360	430	ProSiteProfiles	ARID domain profile.	35	126	IPR001606	GO:0003677
	Accr8g02360	430	ProSiteProfiles	HMG boxes A and B DNA-binding domains profile.	253	320	IPR009071	-
	Accr8g02360	430	MobiDBLite	consensus disorder prediction	323	430	-	-
	Accr8g02360	430	FunFam	High mobility group B protein 15	29	141	-	-
	Accr8g02360	430	Gene3D	-	27	133	IPR036431	GO:0003677
	Accr8g02360	430	SUPERFAMILY	ARID-like	33	128	IPR036431	GO:0003677
	Accr8g02360	430	FunFam	High mobility group B protein 15	235	330	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr8g02360	Accr-Chr8	47238389	47241977	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr8g02360	1	351	ARID Transcription Factor Family	AT1G04880	56.873	1.16e-125	369

Showing 1 to 1 of 1 entries

Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	ARID	Accr8g02360		ARID	9.2e-18	CL0123

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr8g02360	-		-	pcin:129308526	654.44

Showing 1 to 1 of 1 entries