Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02359 ATGGATTACAAGTTTCCCAAGATGGAAATCTCCAAGGAAAAGGAATTTTCAACTTGCTTTCAAGAAACGGCAATTGGATCAAATCCAAACATTAGAGGCTCTCAGACTCTCGCTGCTCATCACATTCATGTGGCAAGAGGGGTGGATTCAATATCATCAGAAAAGCTTCTTCAAATTTCAGATTCTACATCAACAATGGAAGAGCTGACAGGGGCCTCTTTCACTAGTCTTCTCTTTCAAAGGTTCACTGATCAAGAGGAAATCACCCCAGTGCAACAGAAAAATCAATTCCTTTCTGAATTCAACCCTATATCTACTCCTCCAAATGCTTCAACCTCAAGAGCCAGAGAAAGTTTCATTCCTCTAAATCTATTGGAAACACTTCCAGCATTACCAAGAGCAGACGCATCTGATGAGTCAGCTTCTCCAGCTTCTTCAACTGCTACCTGTAGATTTCCTTATTTGACATTGTTTCTGCAGGAGCCCTCCAGCTTATTTTCATCATCCTCTAAGGTCACTGAGTCCCCAGGCAAGCCAACAATCTCAGACACTTCATTTTCTGTGTCTCAGTGTCATGCAATAGAGAGCCAGGAAGTAAAGGATCCACTCAGAATGAATCAGAATCTTAGAAACTTCAGATCCAAGTCTATTAATGACTTCTGCTTGAGCACCACCAAGACTCAGCCTATGAAGTATTCTGCAGGACGAGGCAAGCTGTTTAAGGGGGTGAGGCAAAGACATTGGGGAAAATGGGTTGCAGAGATTAGACTACCAAGGAATAGAACTAGGGTTTGGCTAGGGACATTTGACACGGCTGAAGATGCAGCCATGGCCTATGACACAGCTGCATACATACTTCGTGGAGAATATGCTCAACTCAACTTTCCAGATCTGAAGCATCATATTAAGGCGAATTCTTTGAATGGAACAACAGCTGCCCTACTCGAGGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCGCAAAGAGTGCCCACTGATTCCTTGCCAGGATCATTGGATAAGAACCCTGTTGAGAACGCCAAAATCAACGGTAAAAATCAGAATCAAGCTAAAAAAGAATGGCAGTTTGAGATACAGAACAAGGTTGGAGTTGATGAAAAAAACAATCATCAAGAGATATCGGACATGGAAGCTATTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATTATTTGGGATTCTCTTCTAGTCTCCGATTCATGA 1230 0.422 MDYKFPKMEISKEKEFSTCFQETAIGSNPNIRGSQTLAAHHIHVARGVDSISSEKLLQISDSTSTMEELTGASFTSLLFQRFTDQEEITPVQQKNQFLSEFNPISTPPNASTSRARESFIPLNLLETLPALPRADASDESASPASSTATCRFPYLTLFLQEPSSLFSSSSKVTESPGKPTISDTSFSVSQCHAIESQEVKDPLRMNQNLRNFRSKSINDFCLSTTKTQPMKYSAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAMAYDTAAYILRGEYAQLNFPDLKHHIKANSLNGTTAALLEAKLQAISQGISSQRVPTDSLPGSLDKNPVENAKINGKNQNQAKKEWQFEIQNKVGVDEKNNHQEISDMEAIQLSRMPSLDMDIIWDSLLVSDS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02359 409 PRINTS Ethylene responsive element binding protein signature 240 251 IPR001471 GO:0003700|GO:0006355
Accr8g02359 409 PRINTS Ethylene responsive element binding protein signature 262 278 IPR001471 GO:0003700|GO:0006355
Accr8g02359 409 CDD AP2 238 298 IPR001471 GO:0003700|GO:0006355
Accr8g02359 409 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 105 404 - -
Accr8g02359 409 SMART rav1_2 239 302 IPR001471 GO:0003700|GO:0006355
Accr8g02359 409 SUPERFAMILY DNA-binding domain 239 297 IPR016177 GO:0003677
Accr8g02359 409 ProSiteProfiles AP2/ERF domain profile. 239 296 IPR001471 GO:0003700|GO:0006355
Accr8g02359 409 Pfam AP2 domain 240 288 IPR001471 GO:0003700|GO:0006355
Accr8g02359 409 Gene3D AP2/ERF domain 239 297 IPR036955 GO:0003700|GO:0006355
Accr8g02359 409 FunFam Ethylene-responsive transcription factor 2 238 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02359 Accr-Chr8 47223973 47225202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02359 120 404 AP2-EREBP Transcription Factor Family AT4G13620 43.493 1.87e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr8g02359 AP2 4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02359 - - pcin:129309727 583.948