Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02346 ATGGCTTCTTCTCTGAATCCGCTTCTCCTCTGTTTTCTGATTCTGTGCCTGCCTTCTGTTTGTGTTTTTGCTCAAACCAGTAGAAGTAATATCAAAGTGGGCGATTCTTTCACCGCAGATGGCAACAACACCTCATGGGTGGTTTCACCTTCTGGGGATTTTGCCTTTGGGTTTCAACCACATAAAAACAACAGTTTCTTCTTGCTCTCCATCTGGTATGCCAACATTCCAAGCAAAACCATCGTTTGGTATGCCAATGGAGACAATCCTGCCCCAAAGTGGTCAAGAGTTCAGCTTACTGATTCAGAAGGGCTTAAGCTTACTTATCCTGATGGTCGAATTCTGTGGGCACCAGAAAATAACCCTTCTGGTAGTGTTGCTTCTGGTTCCTTGAATGACTCTGGCAATTTTGTTCTTCATGATGAGACATCTAACTCTGTCTGGGAGACCTTCAAGAATCCTAAAGACACCATGTTGCCCTCACAGACTTTGGAGAAGGGAGAAAAGCTTTCTTCTCGGAGGTCAGAGGCGGATTTCGCACGGGGGAGGTTTCAACTTGTTCTCCAGGATGATGGTAATCTTGTGTTGCATTCTGTAAACCTACCATCTGAGTATGCTAATGAAAATTATTTCGAAACTGGAACTTCTGGGGCCGATAATTCAAGTCGTGGAATTCGACTAGTCTTCAACAAATCTGGAGAATTTTATGTTTTAAGGGAGAACAATGATACATACACCTTCTCAAGCCAGAGCTTTCCCTCTCCAAGTCAATTTTATCTTCGAGCTACTCTTAATTTTGATGGAGTTCTCACTTTCTATCAACATCCGAAGGGTTCATCTGGAACTTGGACACCTATCTGGTCAAAGCCAGATAATATCTGTAATGCAAAGCTCATCAGTGAAGGAACAGGCATTTGCGGATATAATAGCATTTGTAGATTGGGTGATAATATTAGGCCAAATTGTACATGCCCACAAGGTTATTCCCTACTAGATCCTGATGATCCATATGGTAGTTGTAAACCAGATTTCATACAGGGCTGTAAAGAAGATGAGCTTAGTCAAGGGAAAGATCTATATCACTTTGTGGAGTTGCAAGATACTGATTGGCCTGGCTCTGATTATGCGCGTCTAGAGCCTTTTACAGAAGACCAGTGCAAAAGGGCCTGCATGGAAGATTGTTTTTGTGCCGTTGCCATTTTCAGAGCAGGTGACATTTGCTGGAAAAAGAGGCTTCCACTTTCAAATGGCAAATATGACACGAGTCTTAATGGTGGTAAGGCTCTTGTCAAGGTGAGGAAAGACGATTCCTCCCTAATTGGTCCTCCTGGTCCTCCAATCATCGAAAGAAAGAATCAGGACACTTTGATTTTAGCGGTTTCTGTCCTCTTGGGTAGCTCTGCCTTTCTTAATCTCGTATTAATTGGAGCATTGTGTCTAGGCCTTTCCTCCATTTACCAATTCAAGAAGAAGCTTAAAAATGTTTACCGAAGTGACAGTGCTGTTGAAAGCAATTTGCGCTGTTTTACTTATAAGGAGCTTGAAGAGGCCACAAATGGATTCAAGGAAGAATTAGGAAGAGGAGCTTTCGCTGTTGTTTACAAAGGAGCCATTAACATGGGTTCTGCGGTAAACGTAGCAGTCAAAAGGTTGAACACCTTTCTTTTGCAAGAAACTGAGAAGGAATTCAAGAATGAAGTTAATGTCATTGGTCAGACCCATCACAAGAATTTAGTTCGGTTGCTTGGGTTCTGTGAGGATGGAACAGAAAGGATGTTGGTTTATGAGTATATGAGCAATGGCACATTAGCTAGCCTTCTTTTCGGTGACTCAAAACCCAACTGGAACCTACGTCTAAAAATGGCATTTGGGATTGCAAGAGGACTTGTTTACTTACATGAAGATTGTGACACCCAGATCATCCACTGCGACATAAAGCCTCAAAACATACTCCTCGATGACTACTTTAATGCTCGTATCTCTGACTTTGGATTAGCCAAGCTCTTAAACATGAATCAGAGCCGAACCCATACAGCTATTAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACATGCCTATCACGGCCAAAGTAGATGTCTATAGCTTTGGCGTCTTGCTGCTGGAGATAATCTGTTGCAGAAGAAGTGTGGACACGGAACCAGAGAATGAGGAGAGAGCAATATTATCAGATTGGGCGTATGACTGCTACACAACAGGTTCTCTGAAGGCTTTGGTTGAAGAAGATCAGGAGGCACTAGATGACAAGAACCTGGAAAAGTTGTTAATGATTGCTATTTGGTGTATACAAGAGGACCCAACTCTTAGACCCACCATGAGAAAAGTTTCTCAGATGCTTGAAGGAGTTGCTGAAGTGCTTGCTCCACCATGCCATAACCCAAACAGTGTGACTACAGATCACTATTTATGA 2439 0.4256 MASSLNPLLLCFLILCLPSVCVFAQTSRSNIKVGDSFTADGNNTSWVVSPSGDFAFGFQPHKNNSFFLLSIWYANIPSKTIVWYANGDNPAPKWSRVQLTDSEGLKLTYPDGRILWAPENNPSGSVASGSLNDSGNFVLHDETSNSVWETFKNPKDTMLPSQTLEKGEKLSSRRSEADFARGRFQLVLQDDGNLVLHSVNLPSEYANENYFETGTSGADNSSRGIRLVFNKSGEFYVLRENNDTYTFSSQSFPSPSQFYLRATLNFDGVLTFYQHPKGSSGTWTPIWSKPDNICNAKLISEGTGICGYNSICRLGDNIRPNCTCPQGYSLLDPDDPYGSCKPDFIQGCKEDELSQGKDLYHFVELQDTDWPGSDYARLEPFTEDQCKRACMEDCFCAVAIFRAGDICWKKRLPLSNGKYDTSLNGGKALVKVRKDDSSLIGPPGPPIIERKNQDTLILAVSVLLGSSAFLNLVLIGALCLGLSSIYQFKKKLKNVYRSDSAVESNLRCFTYKELEEATNGFKEELGRGAFAVVYKGAINMGSAVNVAVKRLNTFLLQETEKEFKNEVNVIGQTHHKNLVRLLGFCEDGTERMLVYEYMSNGTLASLLFGDSKPNWNLRLKMAFGIARGLVYLHEDCDTQIIHCDIKPQNILLDDYFNARISDFGLAKLLNMNQSRTHTAIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIICCRRSVDTEPENEERAILSDWAYDCYTTGSLKALVEEDQEALDDKNLEKLLMIAIWCIQEDPTLRPTMRKVSQMLEGVAEVLAPPCHNPNSVTTDHYL 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02346 812 Gene3D Transferase(Phosphotransferase) domain 1 598 796 - -
Accr8g02346 812 ProSitePatterns Protein kinases ATP-binding region signature. 525 549 IPR017441 GO:0005524
Accr8g02346 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 152 - -
Accr8g02346 812 SMART serkin_6 519 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02346 812 Pfam D-mannose binding lectin 80 167 IPR001480 -
Accr8g02346 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Accr8g02346 812 Pfam Protein tyrosine and serine/threonine kinase 521 789 IPR001245 GO:0004672|GO:0006468
Accr8g02346 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 273 IPR036426 -
Accr8g02346 812 Gene3D - 23 152 IPR036426 -
Accr8g02346 812 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02346 812 CDD PAN_AP_plant 354 432 - -
Accr8g02346 812 Gene3D - 153 285 IPR036426 -
Accr8g02346 812 SMART blect_4 37 154 IPR001480 -
Accr8g02346 812 CDD STKc_IRAK 525 791 - -
Accr8g02346 812 FunFam S-receptor-like serine/threonine-protein kinase 488 597 - -
Accr8g02346 812 CDD B_lectin 48 154 IPR001480 -
Accr8g02346 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 197 IPR036426 -
Accr8g02346 812 ProSiteProfiles Bulb-type lectin domain profile. 22 152 IPR001480 -
Accr8g02346 812 SUPERFAMILY Protein kinase-like (PK-like) 501 790 IPR011009 -
Accr8g02346 812 PIRSF SRK 1 811 IPR024171 GO:0004674
Accr8g02346 812 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Accr8g02346 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 797 - -
Accr8g02346 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02346 Accr-Chr8 47022053 47094934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02346 505 791 Receptor kinase-like Gene Family AT1G60800 44.218 7.73e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g02346 PK_Tyr_Ser-Thr 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02346 - - gmx:100815462 1037.71