Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02315 3954 Gene3D - 1166 1388 IPR027417 -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3773 3954 - -
Accr8g02315 3954 SMART SnAC_2 1451 1548 IPR029295 GO:0042393
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2374 2401 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2288 2330 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 284 317 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1968 2125 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2288 2350 - -
Accr8g02315 3954 Pfam Snf2-ATP coupling, chromatin remodelling complex 1452 1548 IPR029295 GO:0042393
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1611 1634 - -
Accr8g02315 3954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 894 1156 IPR027417 -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3029 3053 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 118 161 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3893 3940 - -
Accr8g02315 3954 SMART ultradead3 920 1114 IPR014001 -
Accr8g02315 3954 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 936 1103 IPR014001 -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3324 3609 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 108 227 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3541 3563 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2708 2724 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2660 2676 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2658 2683 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 162 191 - -
Accr8g02315 3954 Gene3D - 916 1165 IPR038718 -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2103 2117 - -
Accr8g02315 3954 CDD SF2_C_SNF 1236 1368 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1654 1684 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2034 2087 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1788 1843 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3725 3745 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3671 3761 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3593 3609 - -
Accr8g02315 3954 Coils Coil 738 758 - -
Accr8g02315 3954 SMART QLQ_2 317 352 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr8g02315 3954 MobiDBLite consensus disorder prediction 860 890 - -
Accr8g02315 3954 ProSiteProfiles HSA domain profile. 743 817 IPR014012 -
Accr8g02315 3954 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1158 1439 IPR027417 -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3690 3714 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1805 1820 - -
Accr8g02315 3954 Pfam Helicase conserved C-terminal domain 1245 1358 IPR001650 -
Accr8g02315 3954 CDD DEXHc_SMARCA2_SMARCA4 921 1158 - -
Accr8g02315 3954 FunFam Chromatin structure-remodeling complex protein SYD 915 1165 - -
Accr8g02315 3954 Coils Coil 1860 1887 - -
Accr8g02315 3954 SMART helicmild6 1274 1358 IPR001650 -
Accr8g02315 3954 Pfam SNF2-related domain 928 1219 IPR000330 GO:0005524|GO:0140658
Accr8g02315 3954 MobiDBLite consensus disorder prediction 358 383 - -
Accr8g02315 3954 FunFam Chromatin structure-remodeling complex protein SYD 1166 1388 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3343 3358 - -
Accr8g02315 3954 Coils Coil 839 859 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 3776 3805 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1981 2009 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1696 1717 - -
Accr8g02315 3954 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1248 1394 IPR001650 -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 2706 2727 - -
Accr8g02315 3954 MobiDBLite consensus disorder prediction 1696 1767 - -
Accr8g02315 3954 PANTHER SNF2/RAD54 HELICASE FAMILY 638 1555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02315 Accr-Chr8 46740445 46763073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02315 1245 1415 RAD5 or RAD16-like Gene Family AT5G22750 33.918 4.99e-21 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Accr8g02315 SNF2_N 3.6e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02315 - - pcin:129309682 5221.37