Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02313 ATGGACTGCAATAAAGAGGAGGCCTTACGGGCCAAGGTCATTGCTGAAAAGAAGATGGAAAGTAAAGATTTCGCTGGAGCTCGCAAAATTGCTCTCAAAGCCCAGCAACTATATCCTGACCTGGAGAATATAACTCAAATGCTTATTATATGTGATGTGCATTGCTCTGCTGAGCAGAAATTATTTGGGAATGAGATGGACTGGTATGGAATTCTTCAAATTGGGCAGTCAGCTGATGAGGCAATGATAAAGAAGCAATACAGAAAGTTTGCCCTTCAACTTCATCCTGACAAGAACAAGTTTTCTGGTGCAGAATCTGCATTTAAGCTAATTGGGGAAGCCCAAAGAGTACTTTTGGACAGAAATAAACGTTCTGAACTTGACATGAAGTACAGAGTTCATGTGAACAGAACTACAAGGCCATATCAGCGGGCACAGAAGTTTCATACTAATGTGAATGCTGGGGTGCAAAACAATGTCAGGGCCAATGTTTCCAGCATGAATCCTCAGAAGCAGCAGCAGCAGCAGCAGCCTAGGCAATCAACTCAGCCGGGGCCCAATGGTAGCCGCCCTACATTTTGGACTGCCTGCCCATATTGTTCTAGTAGATATGAGTTTCACTTTGAAGCAGTGAATAGATCTGTTTCCTGTCACACTTGTCATAGGCCCTTTGTTGCATATGTGCAAGGTACGTCGGCGGCTGCTAATTCAAGTCGTCAAGCTTTTGGCCAACAAAAAGATGATTTAAATCATGGCGTTAATGTTGGATCTCAAGGTATGAATGCTGGGAATGTCAATTCAAAGCCTTCTGCACAAAAAGGCCCCAGCGTCTCTGATAAGCTGAATAAAAAGAGAAAGAGGAAGAAGGTAGAAGAATCTAGTGAAAGTGTTGATTCCCAAGACAGCAATGATTCGGAAGATGATATGTTTGTTGACAGCGATGGTTTTCCTGGTGAACAATACCATCCAACTGATCGACGTAGATCTACAAGGTCTAAACCTCAGGTTGTTTATAACGAGAATGGAAGTGATGACGACAACGACCTTTTAAAACCCTCAACAGGGGTCAAGGGAAGTGGCTCATGTGGTGCAGGAGAAGACAAAGGGGAGACAGCTAAAATGAATAATTGTAATGGCTCAGCTGCTGACCTGAAAGATGATCAGAAAGAGGTGAAACAGAAAAACAATCGTTATTCTGAAGAGAGCGTACACAAGGGAAATGAGGAAAGTCTGAACACGAGGGGGAAAGAAGCAAACCATTCCTCAAAGGGGACAGGAGAAGCAGCAGAAGCTCCAACCTTTTTTGTCTTACCTGATGCAGAGTTCAGTGACTTTGAAATGGACAAGAAAGAAGATAGTTTTGCAAATGGACAGATTTGGGCTATATATGACACAATTGATGGCATGCCGAGATTCTATGCTTTGATCAGGAAAGTTCTTTCTCCTGGGTTCAAGCTGCGAATAACATGGTTTGAAGCAGATCCAGATGACGAGGATGAAAGCAACTGGGTAGACAAAGATCTGCCAGTTGCTTGTGGGAAGTATGTGCTTGGCAACACTGAAGTTACTGAAGATCGTCTTATGTTCTCACATCTAATTTTGTGTGAAAAGATTAGCCGCAATACTTTTAAAGTTTTTCCTAAAAAGGGGGAAACCTGGGCTCTGTTTAAAAATTGGGATATCAAATGGTACACTGATGTGAAAGCTCATGAGAAGTATGAATTTGACTTCGTTGAAATTGTATCAGATTATGTTGAAGGAGAGGGGGTCTCTGTTGCATACTTGGAGAAGTTGAAAGATTTTGTGAGTCTCTTCACTCGAGCTAACAAGGGCGGTAATGATTCATTTCAAATTCCATCTGTGGAGTTATTTAGATTCTCTCATAGGATTCCTTCATTTAAAATGACTGGTCAGGAAAGAGTGGGTGTCCCTAAAGGATCTTTTGAACTTGATCCGGCATCTTTGCCGGAAAATCTTTGA 1980 0.4217 MDCNKEEALRAKVIAEKKMESKDFAGARKIALKAQQLYPDLENITQMLIICDVHCSAEQKLFGNEMDWYGILQIGQSADEAMIKKQYRKFALQLHPDKNKFSGAESAFKLIGEAQRVLLDRNKRSELDMKYRVHVNRTTRPYQRAQKFHTNVNAGVQNNVRANVSSMNPQKQQQQQQPRQSTQPGPNGSRPTFWTACPYCSSRYEFHFEAVNRSVSCHTCHRPFVAYVQGTSAAANSSRQAFGQQKDDLNHGVNVGSQGMNAGNVNSKPSAQKGPSVSDKLNKKRKRKKVEESSESVDSQDSNDSEDDMFVDSDGFPGEQYHPTDRRRSTRSKPQVVYNENGSDDDNDLLKPSTGVKGSGSCGAGEDKGETAKMNNCNGSAADLKDDQKEVKQKNNRYSEESVHKGNEESLNTRGKEANHSSKGTGEAAEAPTFFVLPDAEFSDFEMDKKEDSFANGQIWAIYDTIDGMPRFYALIRKVLSPGFKLRITWFEADPDDEDESNWVDKDLPVACGKYVLGNTEVTEDRLMFSHLILCEKISRNTFKVFPKKGETWALFKNWDIKWYTDVKAHEKYEFDFVEIVSDYVEGEGVSVAYLEKLKDFVSLFTRANKGGNDSFQIPSVELFRFSHRIPSFKMTGQERVGVPKGSFELDPASLPENL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02313 659 SUPERFAMILY Chaperone J-domain 63 135 IPR036869 -
Accr8g02313 659 SMART dnaj_3 66 123 IPR001623 -
Accr8g02313 659 MobiDBLite consensus disorder prediction 319 333 - -
Accr8g02313 659 MobiDBLite consensus disorder prediction 238 429 - -
Accr8g02313 659 Gene3D DnaJ domain 64 184 IPR036869 -
Accr8g02313 659 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 659 - -
Accr8g02313 659 MobiDBLite consensus disorder prediction 238 277 - -
Accr8g02313 659 MobiDBLite consensus disorder prediction 383 423 - -
Accr8g02313 659 Pfam Domain of unknown function (DUF3444) 435 639 IPR024593 -
Accr8g02313 659 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Accr8g02313 659 MobiDBLite consensus disorder prediction 165 191 - -
Accr8g02313 659 CDD DnaJ 67 120 IPR001623 -
Accr8g02313 659 Coils Coil 381 401 - -
Accr8g02313 659 MobiDBLite consensus disorder prediction 297 313 - -
Accr8g02313 659 PRINTS DnaJ domain signature 69 87 IPR001623 -
Accr8g02313 659 PRINTS DnaJ domain signature 103 123 IPR001623 -
Accr8g02313 659 PRINTS DnaJ domain signature 87 102 IPR001623 -
Accr8g02313 659 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02313 Accr-Chr8 46699141 46701120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02313 4 226 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 1.23e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02313 - - pcin:129310047 1083.94