Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02295 ATGGACAATCATCGCCGTTCCCCAAGCGCTGAATCTGGTGAATTAGGAAAGGGGAACTCGAGAGAGAAGAAGACTTCTTCAAAAGGCAGAAGGGCTCGGTCTGTTCTTTATGGTTCCTGGAAAGGATTGGACTTGGAGCCTTTGTGCACCAAAGAAGAAGGCACATCCCAGAGGCCTGCTAGTGGAGACATGCCTGAGGACTTCTGTAGAACTTTAAATTTTGAAGCTTCTTCTTCCAATGCCAGCACTTCTGACACAGAATGTCCGCTAGATACTGCAAATAATACTCAGTGGCGCATTATCCGTTTCATGAAAAAAGGATCTTACATGCGCTTCAATCATCCACCTAAAAATATTCCCAAACTCACCCGAAAAACAGTTAAACGGATCAAAGAAGACCTCATCCCTGTTCTACATTCTTTAGATTCAACCCCATCACTTGACCCAGATTCAACCTCATCTTTTAATCCAAAAGATCGAAATAATTTTCCCTTTAAGTCTTCATGGAAACATTATTCTTTTGCACAGCTCCAAGCTGCCACCAACAACTTCAGTGATGATATGTTGATTGGGAAGGGAGGTTATGCTGAGGTTTACAAAGGAAAAATGGAAGATGGGACATATGTTGCCATCAAAAAGCTGACAAGAGGAACCCAAGAAGAAATGACATCTGATTTCTTGTCTGAACTTGGTATTATAGTACATGTTGATCATCCCAATATTGCCAAATTGATTGGTTATGGTGTGGAAGGGGGCATGTTTCTTGTTCTTCAGTTATCTCCACATGGCAGCCTCGCAGGCATACTTTATGGGCCTCGAGAGAGACTGGACTGGAACATCAGATTTAAGGTTGCTCTAGGGACTGCTGTGGGTCTACAATATCTGCATGAGGGATGCCAAAAAAGGATCATCCACAGAGATATCAAGGCTGCCAATATTCTTCTGTCTGAGGATTTTGAGCCTCAGGTATCTGATTTTGGGCTTGCAAAGTGGTTACCTGGTCAGTTGTCTCACCATACTGTGGACAAAATTGAAGGCACATTTGGTTACCTTCCTCCCGAATTCTTCATGCATGGTATAGTAGATGAAAAGACCGATGTCTTTGCTTATGGAGTGCTGTTATTAGAGCTCATTACAGGAAGACAGGCTTTGGATAGCTCTCAGAAAAGTTTGGTGATGTGGGCAAAACCTTTGCTGTCAGTGGACAAAATCAAAGAGCTGGTAGACCCGTATCTGAGTGATGCATACGATGAAGAACAGATTAAAATTGTTATGATGACGGCTTCCTTGTGTATAGAGCAGTCTTCATGTGAGAGACCATATATGAGCGAGGTTGTGAAGACTCTTAAAGGAGAAGAAGGTGGATTGGAGTTCATAATGGAGCGCCAGAAGTCAAAACTGAGAAGGACATATTCTGAGGAGCTGCTAGATGCAGAGGATTACAATTCAACCAAGTACTTGAGTGTGAATGACTCGAGTTAA 1482 0.4271 MDNHRRSPSAESGELGKGNSREKKTSSKGRRARSVLYGSWKGLDLEPLCTKEEGTSQRPASGDMPEDFCRTLNFEASSSNASTSDTECPLDTANNTQWRIIRFMKKGSYMRFNHPPKNIPKLTRKTVKRIKEDLIPVLHSLDSTPSLDPDSTSSFNPKDRNNFPFKSSWKHYSFAQLQAATNNFSDDMLIGKGGYAEVYKGKMEDGTYVAIKKLTRGTQEEMTSDFLSELGIIVHVDHPNIAKLIGYGVEGGMFLVLQLSPHGSLAGILYGPRERLDWNIRFKVALGTAVGLQYLHEGCQKRIIHRDIKAANILLSEDFEPQVSDFGLAKWLPGQLSHHTVDKIEGTFGYLPPEFFMHGIVDEKTDVFAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKIKELVDPYLSDAYDEEQIKIVMMTASLCIEQSSCERPYMSEVVKTLKGEEGGLEFIMERQKSKLRRTYSEELLDAEDYNSTKYLSVNDSS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02295 493 PANTHER OS08G0249100 PROTEIN 53 481 IPR046958 -
Accr8g02295 493 MobiDBLite consensus disorder prediction 1 33 - -
Accr8g02295 493 Gene3D Phosphorylase Kinase; domain 1 156 258 - -
Accr8g02295 493 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 161 259 - -
Accr8g02295 493 Pfam Protein tyrosine and serine/threonine kinase 189 449 IPR001245 GO:0004672|GO:0006468
Accr8g02295 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Accr8g02295 493 ProSiteProfiles Protein kinase domain profile. 184 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02295 493 Gene3D Transferase(Phosphotransferase) domain 1 261 469 - -
Accr8g02295 493 SMART serkin_6 184 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02295 493 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 261 463 - -
Accr8g02295 493 ProSitePatterns Protein kinases ATP-binding region signature. 190 213 IPR017441 GO:0005524
Accr8g02295 493 MobiDBLite consensus disorder prediction 1 25 - -
Accr8g02295 493 SUPERFAMILY Protein kinase-like (PK-like) 169 466 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02295 Accr-Chr8 46530695 46533428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02295 172 453 Receptor kinase-like Gene Family AT1G53420 43.448 8.04e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr8g02295 PK_Tyr_Ser-Thr 7.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02295 - - lja:Lj6g3v1915960.1 604.364