Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02280 ATGGGTTGTGTCCACGGCAAGTGTTGTAGCCGCTACCCGCCGCCGTCAGATGGTGGTTCTGTGGACTGCCGTGAACTCGGTCTTTCCCGTTCCAAGCGGAAACACATACTTACTCAGAAACCACTGGAGTCTACTCCTGTTCCGTCCCACAACTTCACTTTGGAATACTCTGTTCTTACACAGAGAGGATATTACCCTGACACGCCAGCTAAAGAAAACCAAGATAGTTACTGCATTAGGACACAAATTCAAGGCAACCCAAGTATACATTTCTTTGGTGTCTATGATGGGCACGGCCAATATGGTAGTCAGTGTTCGAACTTTGTTAAAGATAGGTTTGTAGAAACATTATCAAATGACCACACTTTGTTGGATGACCCTGTTAAAGCATATGCTTCGGCATTTGCATCAACTAATCAAGAATTGTATAATTCTGAGATTGATGATTCTATGAGCGGCACAACTGCAATTACAGTGCTTGTTATTGGAGACACTCTATATGTTGCTAATGTTGGTGATTCGCGAGCAGTTTTAGCTGTTAAGGATGGGAACCGCATTGTCGCTAAGGACTTGTCCTCTGATCAGACACCGTTCAGAGAAGATGAATGTGAGAGAGTGAAGCTTTGTGGGGCAAGGGTGCTGAGTTTTGATCAGGTGGAAGGGCTTAAGGATCCAAATATTCAGACTTGGGGTGATGAAGAGAGCGAGGGTAGGGATCCTCCCAGGTTATGGCTTCCAAATGCTTTGTGTCCAGGAACTGCATTTACAAGGAGTGTTGGGGATAGTCTTGCAGAGACCATTGGTGTCATTGCTATTCCAGAGGTGTCAATGGTTCGGCTTACACCCAATCATCCATTTTTTGTTGTTGCAAGTGATGGCGTGTTTGAGTTCCTATCTAGCCAAACTGTTGTTGATATGGCAGCAAGCTATACTGATCCTCGTGATGCATGTGCTGCAATTGCTGGGGAATCATATAAGCTATGGTTGGATCATGAGATCCGAACAGATGATATTACGATTATCATTGTTCATATCAAAAGCCTGCCTAATTTCGTTACACGTGTGGCATCAAGTGAGATCAATGTTAGTGCCTTAGCAAGGGCCAAGAAAGGAACTTCTGAGATATCTCCAACCACATCTGATGTTCATCGTTGTGTGGGGAATGACTTCTCTCATATACAGTCCTGTCAGCATGTGTTGTCCATGAGAAATGCAGCAATAGTGGTCCCGACTCCAGCATGCCAAGGGTCGGTTGGATTGTGA 1263 0.4481 MGCVHGKCCSRYPPPSDGGSVDCRELGLSRSKRKHILTQKPLESTPVPSHNFTLEYSVLTQRGYYPDTPAKENQDSYCIRTQIQGNPSIHFFGVYDGHGQYGSQCSNFVKDRFVETLSNDHTLLDDPVKAYASAFASTNQELYNSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAKDLSSDQTPFREDECERVKLCGARVLSFDQVEGLKDPNIQTWGDEESEGRDPPRLWLPNALCPGTAFTRSVGDSLAETIGVIAIPEVSMVRLTPNHPFFVVASDGVFEFLSSQTVVDMAASYTDPRDACAAIAGESYKLWLDHEIRTDDITIIIVHIKSLPNFVTRVASSEINVSALARAKKGTSEISPTTSDVHRCVGNDFSHIQSCQHVLSMRNAAIVVPTPACQGSVGL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02280 420 CDD PP2Cc 71 328 IPR001932 -
Accr8g02280 420 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 347 - -
Accr8g02280 420 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Accr8g02280 420 SUPERFAMILY PP2C-like 44 348 IPR036457 -
Accr8g02280 420 Gene3D - 42 347 IPR036457 -
Accr8g02280 420 PANTHER PROTEIN PHOSPHATASE 71 344 IPR015655 GO:0004722|GO:0006470
Accr8g02280 420 Pfam Protein phosphatase 2C 84 320 IPR001932 -
Accr8g02280 420 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Accr8g02280 420 SMART PP2C_4 51 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02280 Accr-Chr8 46400876 46403258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02280 1 350 PP2C-type Phosphatase Gene Family AT3G06270 71.875 0.0 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g02280 8 46400876 46403258 Accr8g02280 8 46400876 46403258 ECH