Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02254 ATGAATATCGTCTCGTATTCTGTCTGCCAACAAGTACGGCCCATAGTCAATTTCCAAAGGCCACTCTCCATGGAGCCTTTCTTCCGCTACCTCCGTAAAGAAAAGGTCGTCGTCATAATTGGCGCCACCGGTACCGGCAAGTCCAAACTCGCCATCGACCTCGCCTCCTCCTTCCCTCCTGCGGAGATCGTCAACTCCGACAAAATGCAAGTTTACCAGGGCCTCGACATCACCACCAACAAGGTCACGGACGATGAATGCCGCGGCGTCCCTCACCACCTCCTTGGAATTGCCGACGCTAACTCCAATTTCACCGCCGATGACTTCACCCGCCACGCCTCTGCTGCCATTGATTCCATCGTCCAACGTGATTGCCTTCCTATCATCGCCGGTGGCTCCAATTCCTATATCGAAGCCCTCGTCGAAGACCACGCTGCGTTTCGGTTGAAGTACGAGTGTTGCTTTCTTTGGGTGGACGTTCCGCTTCACGCCCTTGATCCATTCCTCTCGGAGCGGGTCGATCGGATGATCCAAGCGGGTCAGTTGGATGAGGTCCGTCAGTTTTTCGACCCGGCCCGGGATTACACGACCGGAATCAGAAAAGCCATTGGAGTCCCTGAATTTGACGAGTTTCTTCGAGCAGAGGCCACTGCCGATGGAGGGACCAAGAAGAGGTTACTAGAGGCAGCCATTGCCAAGATTAAAGCCAACAATTGCTCGCTGGCTCGTCGACAGCTTCAGAAGATTCATCGGCTTTACAACATGTGGAAGCGAAACATGTATCGCCTCGACACTACAGAGGTGTTCAAAAAATCCGGCGACGAGGCAGAGCAACTGTGGCAGACTCAAGTGCTTGCCAAGAGCCAGAGGATTGTACACAAGTTCCTCTACGATGACAGTCCGGTGGTTCCGGCTGCCACGGTAATGTCGTCAGTGCCGCCGTATCCGCAGCCGAAGCAGGTGGCGATGGCCACCGCAAGTCATTAG 987 0.5441 MNIVSYSVCQQVRPIVNFQRPLSMEPFFRYLRKEKVVVIIGATGTGKSKLAIDLASSFPPAEIVNSDKMQVYQGLDITTNKVTDDECRGVPHHLLGIADANSNFTADDFTRHASAAIDSIVQRDCLPIIAGGSNSYIEALVEDHAAFRLKYECCFLWVDVPLHALDPFLSERVDRMIQAGQLDEVRQFFDPARDYTTGIRKAIGVPEFDEFLRAEATADGGTKKRLLEAAIAKIKANNCSLARRQLQKIHRLYNMWKRNMYRLDTTEVFKKSGDEAEQLWQTQVLAKSQRIVHKFLYDDSPVVPAATVMSSVPPYPQPKQVAMATASH 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02254 328 Pfam IPP transferase 70 144 - -
Accr8g02254 328 Pfam IPP transferase 149 247 - -
Accr8g02254 328 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 260 - -
Accr8g02254 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 145 IPR027417 -
Accr8g02254 328 Gene3D - 33 296 IPR027417 -
Accr8g02254 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 255 IPR027417 -
Accr8g02254 328 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Accr8g02254 328 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 296 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02254 Accr-Chr8 46143008 46143994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02254 150 296 C2H2 Transcription Factor Family AT2G27760 31.429 4.17e-17 80.1