Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02241 ATGTCCCACATAACTGTGGAAAGAAACAGAAGAAGACAGATGAATGAACATCTCAGAGTTTTAAGATCATTGACCCCACGTTTCTATATCAAGAGGGGAGACCAAGCATCTATAGTAGGGGGAGTGATAGAGTTCATAAAGGAGTTACACCAAGTTGTAGAAGTATTGGAGTCCCAGAAAAGGAGGAGGAAGAGTGTGAGCCCTAGCCCTCGTGGTAGTGCTCCTATAACACCAGTTCATCATCAAGTTGTCGATAGTCCCTTTGGATCTGCCGATTCATCGAATAAGGAAGTGGGAGGAGCAGTTAGATGCAACTCTTCAGTTGCTGACGTGGAAGTCAAAATCGAAGGCCCCAATGTGATAGTGAAAGTGATCTCTCACAGGATGCCAGGTCAGCTTGCCAAGATCATAGCAGTTTTAGAAAGGCTTTCTTTTCAAGTTCTTTATCTCAACATCAGTACCATGGACTACACAGTTCTCCACCACTTTGTTGTCAAGATAGGACTGGATTGTCAACTAAGCCTGGAGGAACTAGCAATGGAAGTGCAACGCAGCTTCTCAGATGCTGTTAACAATAGAACTGCACCAATTAATTAG 597 0.4372 MSHITVERNRRRQMNEHLRVLRSLTPRFYIKRGDQASIVGGVIEFIKELHQVVEVLESQKRRRKSVSPSPRGSAPITPVHHQVVDSPFGSADSSNKEVGGAVRCNSSVADVEVKIEGPNVIVKVISHRMPGQLAKIIAVLERLSFQVLYLNISTMDYTVLHHFVVKIGLDCQLSLEELAMEVQRSFSDAVNNRTAPIN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02241 198 Gene3D - 1 65 IPR036638 GO:0046983
Accr8g02241 198 FunFam Transcription factor MUTE 1 67 - -
Accr8g02241 198 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Accr8g02241 198 SMART finulus 4 55 IPR011598 GO:0046983
Accr8g02241 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Accr8g02241 198 MobiDBLite consensus disorder prediction 60 79 - -
Accr8g02241 198 PANTHER TRANSCRIPTION FACTOR FAMA 1 186 IPR044283 GO:0003700|GO:0010052
Accr8g02241 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02241 Accr-Chr8 46052957 46054537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02241 1 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 60.680 2.11e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr8g02241 HLH 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02241 - - pcin:129310160 271.937