Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02240 ATGGATGAAGTTAGTGAAACCTTGAAGGCACAAATAGCATCACTTTTTCGGGTTATCTCTGCTGCTAATTGCTATAAACAGGATAATGTTCCTTGCGAAATCGAAAAGGGTCTTTTCTTGGGTTCGGTTGGCGCTGCAGCTAACAAGGATGCACTTAAAAACCTCGGTGTGACTCATGTTTTAACGGTGGCTAATACTCTGATTCCCGCACATCCTAATGATTTTGTATACAAAACCCTAAATGTTGTTGACAGACAGGACGTAGACATAAAACAGTACTTCAACGAGTGCTTTGATTTTATTGATGAAAGCAAAAGTCTTGGTGGAGGGACTTTAGTTCATTGCTTTGCTGGAAAATCCAGGAGTGTGACTATAGTGGTTGCATATCTGATGAAAACTCGCCGAATGAGTTTATCTCAAGCCCTGGAGCATGTGAAGAGCAGACGACCAGTGGCATCTCCCAACTCAGGTTTCATTCGACAGCTGGAGGACTTTGAAAAGTCTCTTCAAGTTGCAGATTGA 522 0.4215 MDEVSETLKAQIASLFRVISAANCYKQDNVPCEIEKGLFLGSVGAAANKDALKNLGVTHVLTVANTLIPAHPNDFVYKTLNVVDRQDVDIKQYFNECFDFIDESKSLGGGTLVHCFAGKSRSVTIVVAYLMKTRRMSLSQALEHVKSRRPVASPNSGFIRQLEDFEKSLQVAD 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02240 173 ProSiteProfiles Dual specificity protein phosphatase domain profile. 30 171 IPR020422 GO:0006470|GO:0008138
Accr8g02240 173 Pfam Dual specificity phosphatase, catalytic domain 38 167 IPR000340 GO:0008138|GO:0016311
Accr8g02240 173 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 170 IPR029021 -
Accr8g02240 173 CDD DSP 31 164 - -
Accr8g02240 173 SMART dsp_5 30 168 IPR020422 GO:0006470|GO:0008138
Accr8g02240 173 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 27 169 - -
Accr8g02240 173 Gene3D Protein tyrosine phosphatase superfamily 32 173 IPR029021 -
Accr8g02240 173 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 92 150 IPR000387 GO:0016311|GO:0016791
Accr8g02240 173 FunFam Dual specificity phosphatase 12 32 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02240 Accr-Chr8 46032560 46034637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02240 33 170 Protein tyrosine phosphatase (PTP) family AT3G06110 60.870 3.12e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02240 - - pcin:129310161 291.582