Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02239 ATGAGTATGGATGAAGTTAGTGAAACCTTGAAGGCACAAATAGCATCACTTTTTCGGGTTATCTCTGCTGCTAATTGCTATAAACAGGATAATGTTCCTTGCGAAATCGAAAAGGGTCTTTTCTTGGGTTCGGTTGGCGCTGCAGCTAACAAGGATGCACTTAAAAACCTCGGTGTGACTCATGTTTTAACGGTGGCTAATACTCTGATTCCCGCACATCCTAATGATTTTGTATACAAAACCCTAAATGTTGTTGACAGACAGGACGTAGACATAAAACAGTACTTCAACGAGTGCTTTGATTTTATTGATGAAAGCAAAAGTCTTGGTGGAGGGACTTTAGTTCATTGCTTTGCTGGAAAATCCAGGAGTGTGACTATAGTGGTTGCATATCTGATGAAAACTCGCCGAATGAGTTTATCTCAAGCCCTGGAGCATGTGAAGAGCAGACGACCAGTGGCATCTCCCAACTCAGGTTTCATTCGACAGCTGGAGGACTTTGAAAAGTCTCTTCAAGTTGCAGATTGA 528 0.4205 MSMDEVSETLKAQIASLFRVISAANCYKQDNVPCEIEKGLFLGSVGAAANKDALKNLGVTHVLTVANTLIPAHPNDFVYKTLNVVDRQDVDIKQYFNECFDFIDESKSLGGGTLVHCFAGKSRSVTIVVAYLMKTRRMSLSQALEHVKSRRPVASPNSGFIRQLEDFEKSLQVAD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02239 175 FunFam Dual specificity phosphatase 12 34 175 - -
Accr8g02239 175 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 172 IPR029021 -
Accr8g02239 175 SMART dsp_5 32 170 IPR020422 GO:0006470|GO:0008138
Accr8g02239 175 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 94 152 IPR000387 GO:0016311|GO:0016791
Accr8g02239 175 Gene3D Protein tyrosine phosphatase superfamily 34 175 IPR029021 -
Accr8g02239 175 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 29 171 - -
Accr8g02239 175 CDD DSP 33 166 - -
Accr8g02239 175 ProSiteProfiles Dual specificity protein phosphatase domain profile. 32 173 IPR020422 GO:0006470|GO:0008138
Accr8g02239 175 Pfam Dual specificity phosphatase, catalytic domain 40 169 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02239 Accr-Chr8 46032554 46034637 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02239 35 172 Protein tyrosine phosphatase (PTP) family AT3G06110 60.870 2.83e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02239 - - pcin:129310161 293.893