Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02232 ATGATGAAGAAAAGCATGATCCAGAAACAACCATGTCCTGAGAATTTGAATGATGCATCAAGCAGCAGCCCTGGGATCTCCTTAGATGACAGAGACATTAACTGTACTATTGCAATATCTAAGCAGCAATATATTTTGGTGAAAAACTCTGCTTCTCATTGCTTGACCACCAGACTTTACCTGGATTATGCTCGCATGGCCATGGCAGAGATGGTGGGTACTTTCATTCTGATGTTCTGTGTGTGTGGGATCATTTCGAGCACGCAGTTGCAGAATGGACAAGTGGGCCTCCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGGTGATCTTCTCAATAGGGCCAATCTCTTGTGCTCATGTTAACCCGGCCGCCACGATCGCTTTTGCAACATTTGGGCAATTTCCATGGCTGAAGGTTCCAGTTTACATACTAGCACAGATGGTGGGTTCTGTGTTAGCAACATATATTGGTAGCCTCGTGTATGGGATTAAATCAGATGTCATGATGACAAGGCCAATCCAAGGGGCTATGTCAGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATAATGTTCCTTGCTGCAGCATTGACAAGTGAACTTAAAACAGTTGCTCATTTATCTGGTTTTGTTCTTGGAATAGCTATTGGACTAGCAGTGTTAATCACCGGAACTGTTTCAGGGGGATCAATGAATCCTGCAAGATCATTAGGGCCAGCAATAGTGTCATGGGAGTTCAAGGACATATGGATATACATGACAGCCCCCATAATTGGAGCAGTAGCAGGTGTTCTCTTGTTTCGCTTTCTGCGTCTGAAACACCAACCAGGCGCTGCTTTTATCACTCCTACCACAGCTGATCAAGACGCCCATTCTATAACCTTGTTCCCAAGTTAG 906 0.4481 MMKKSMIQKQPCPENLNDASSSSPGISLDDRDINCTIAISKQQYILVKNSASHCLTTRLYLDYARMAMAEMVGTFILMFCVCGIISSTQLQNGQVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAATIAFATFGQFPWLKVPVYILAQMVGSVLATYIGSLVYGIKSDVMMTRPIQGAMSAFWVELIATFIIMFLAAALTSELKTVAHLSGFVLGIAIGLAVLITGTVSGGSMNPARSLGPAIVSWEFKDIWIYMTAPIIGAVAGVLLFRFLRLKHQPGAAFITPTTADQDAHSITLFPS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02232 301 PANTHER AQUAPORIN NIP2-1 45 278 IPR034294 -
Accr8g02232 301 PRINTS Major intrinsic protein family signature 141 160 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 PRINTS Major intrinsic protein family signature 65 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 PRINTS Major intrinsic protein family signature 253 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 PRINTS Major intrinsic protein family signature 185 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 PRINTS Major intrinsic protein family signature 104 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 SUPERFAMILY Aquaporin-like 59 279 IPR023271 -
Accr8g02232 301 Gene3D Glycerol uptake facilitator protein. 29 281 IPR023271 -
Accr8g02232 301 MobiDBLite consensus disorder prediction 1 25 - -
Accr8g02232 301 Pfam Major intrinsic protein 63 270 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr8g02232 301 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02232 Accr-Chr8 45976275 45977824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02232 22 279 Major Intrinsic Protein MIP AT5G37820 35.472 2.79e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02232 K09874 - qsa:O6P43_021616 373.244