Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02220 ATGCAAGAATTTCTGGGTTCTGTTCGCCGATCCTTGGTTTTCAGGAGCCCAGGCGGGGACGATGGAGGGTTTGGTGTTGGCGGTCTGGTCGATAAGATTGGCTCTAGCATTCGCAAATCACGAATTGGGCTCTTCTCTCAGCCACGCGTTAGGGCTCTGCCCCCGGTTCCAAAGGGCAACACTCCCTCGATCCGGTGGCGGAAGGGCGAGTTGATTGGTTATGGTGCCTTTGGTAGAGTCTACATGGGTATGAACATTGATTCCGGGGAGCTTATTGCTGTCAAGCAGGTTTTAATCGCGGCAAGGAGTGCTTCGAAAGAGAAAACGCAGGCTCATATCATGGAACTTGAAGAAGAGGTGAAGCTTCTCAAGAATCTTAAACATCCAAATATTGTTAGATACTTGGGAACTGCTAGGGAGGAGGATTCCTTGAATATCCTGCTGGAATTTGTACCTGGAGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTCCCTGAGTCTGTAATAAAAAAGTATACAAAACAACTCTTACTGGGTCTTGAGTACCTTCACCAGAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGACAATAAAGGATGCATTAAACTCGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAACGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCCCCTGAAGTTATTCTGCAGACAGGGCATAGCTTCTCTGCTGATATTTGGAGTGTGGGATGCACCGTGATAGAGATGGCAACAGGGAAGCCTCCATGGAGTGAACAGTTTCAGGAGGTTGCTGCTCTTTTCCATATTGGGACAACTAAATCCCATCCACCCATACCTGACCATCTTTCTGCTGAGGCAAAGGATTTTTTGTTAAAATGCTTGCAGAAGGAACCGGATCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTGTCACCTGTGAGTATCAAGAATCCAATCCCACATTACGCAGTTCCATTGTGGAATCTTGCAAGAAGATGGTGACATCTGAGACGGATTCTAAAATCTCGGGAATAGGTCTCAAGGATGTTTGTCAAATGGGTAGCATAAGATGCTCATCTGTGTCTCCTGAGGCTCTTTTAAAATCAGATTTCTATCGAGGAACAAGCAATTATGATGATGATATGTGTCAGATAGATGACAAAGATGATCTTTTTGTTGATGCATCAGTAAAATCTAAATCTCCCATTTCAGATGATATAAAGAGTTTTAACCCTATGTGTGAACCTATGGATGAATGGCCATGCAATTTCGATAAAAGTCCAGATTTGGAGAGAAAGGGAACAGACTTGTCTCCTGATCAGACAATGAGAAGCACTGAAGCATCTGAAAAAGTGGAGATTAAATTTTCATTTCCGAGTGAGCCTAAAGGAGCTGATGACGATGAAGAAGTCACTGAGTCAAAAATTAGAGATTTTCTAGATGAAAAGGCTCTGGAACTGAACAAACTCCGAACTCCTCTTTATGAAGAATTCTTTAGCATATCGAACGCAGTTGTTCCTCCCATACCTGTTTCAATTGCGCACAGTGAAGTGGTTTCAGAAGTGTCAAATGTAACACCAAAAAGCAGGTCACCAAGTCAGGCTAGCAGACGATACTCAATGGCTGAGGCTGCTAATATCGCCAGGCATGGAAGTCATTACAAGAATCAATCTAAAGTTAGTTGTGCAAATAGTCGGCCATTGCAGGAAATCCACCCATCTGAGCTTAACGAATGGAAAGAGACACTTCAATATGCTAAGTTGGAATCATTTAGTGCTAGCCCAACTTTCTCAGAGATACGAAGGAAATGGAAGGAAGAACTTGTTGAAGAGCTTGAGAGGAAGCGAGAGATGATGCGTCTGTCAGGCTCAGGCGGGAAGATCACATCCCCAACTGATCGCAATCTTCGTAAACTGACTGAGAGATCACGCTTTGCATTTCCAAGCTAG 2001 0.4368 MQEFLGSVRRSLVFRSPGGDDGGFGVGGLVDKIGSSIRKSRIGLFSQPRVRALPPVPKGNTPSIRWRKGELIGYGAFGRVYMGMNIDSGELIAVKQVLIAARSASKEKTQAHIMELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKKYTKQLLLGLEYLHQNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPPIPDHLSAEAKDFLLKCLQKEPDLRPSASDLLQHPFVTCEYQESNPTLRSSIVESCKKMVTSETDSKISGIGLKDVCQMGSIRCSSVSPEALLKSDFYRGTSNYDDDMCQIDDKDDLFVDASVKSKSPISDDIKSFNPMCEPMDEWPCNFDKSPDLERKGTDLSPDQTMRSTEASEKVEIKFSFPSEPKGADDDEEVTESKIRDFLDEKALELNKLRTPLYEEFFSISNAVVPPIPVSIAHSEVVSEVSNVTPKSRSPSQASRRYSMAEAANIARHGSHYKNQSKVSCANSRPLQEIHPSELNEWKETLQYAKLESFSASPTFSEIRRKWKEELVEELERKREMMRLSGSGGKITSPTDRNLRKLTERSRFAFPS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02220 666 MobiDBLite consensus disorder prediction 447 468 - -
Accr8g02220 666 Coils Coil 106 126 - -
Accr8g02220 666 CDD STKc_MAPKKK 65 328 - -
Accr8g02220 666 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Accr8g02220 666 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 61 341 - -
Accr8g02220 666 MobiDBLite consensus disorder prediction 637 666 - -
Accr8g02220 666 ProSiteProfiles Protein kinase domain profile. 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02220 666 Pfam Protein kinase domain 67 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02220 666 Gene3D Transferase(Phosphotransferase) domain 1 65 361 - -
Accr8g02220 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Accr8g02220 666 FunFam Mitogen-activated protein kinase kinase kinase 2 65 357 - -
Accr8g02220 666 SUPERFAMILY Protein kinase-like (PK-like) 65 329 IPR011009 -
Accr8g02220 666 SMART serkin_6 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02220 666 FunFam Serine/threonine-protein kinase STE11 62 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02220 Accr-Chr8 45889488 45894738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02220 1 644 MAP Kinase Kinase Kinase AT3G06030 59.427 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Accr8g02220 Pkinase 3.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02220 K20606 - cave:132182886 848.966