Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02218 ATGGCCATTGTAGACGGCATTGTCAGTCTCTTTATTCTCATTATGCTCATTCTCATCATCGTCCTCGTCTTCTTTGCCTGTAAACCATGGCGCTTCCTTTTCTCTTCCCGCTCCCGTTCCTCCATCAAGGATGATGAAATTGAGAGGCCTCTTGTCTTAGATGATGCAAATTTGGTACATAACCCAATTAGTGAACTGCCTATAAATTATGATCTTGAGGGTACATCCATCCTCAATGAAGGCCATTTTCGCCCACCTCGACCCCCTGGACTTATTTATAAGCAAAGGCCTTCTGCTGCTTCTTGCCATATGTCTCAAGATGTAATTTCTGATCCTTCAGAGGAGGTTGCTGTTGGCCAGACACTTAAACTGTCTCCAGCACAGTTGGCAGAATTTCAGAAACATAATAGAAATTCTGAAACTGACAGACTGCAAGACTTTGTACAGAGAGATATATTAGATCAAAGAAGTTGCCTCACTCTAGAGGTGATCACTGGTCCTTCTCGTGAACTTCGTTGTTCTGTACAATCAACAATTCCATCCAAGCTACCACTGACCTTGGGAAGAGTTTCTCCTAGTGATTTGTTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCACTAATAAACTGGAATTTGGAGAAAATGAAATGGGAGTTGGTAGATATGGGTAGCCTTAATGGAACACTTTTGAATTCTCAACCAATCAACCATTTAGACCCTGGAAGCAGGCAATGGAGTAATCCAACTGAGCTTGCTAATGGAGATATCATAACACTAGGAATGACAACAAAAGTAATTGTTCATATTACTTCTCAAAATAAGATTCACATTCCCTTTGGAGTTGGTGTCGCATCAGATCCCATGTCTAGGCGTCGAGGAGGGAAAAAGCTCGCCATGGAAGATGTTTGCTATTATCAATGGCCTTTACCTGGATTGGATAAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGCGCTGCCAGATCTGCTAGCAAAGTTTTCCCTGAGATAGTTGCAAATATATTATCAGATTCACTAAAGAGAGAAAAGGTTGTATCAATCTGTGATGCTTCAAATGTTCTTAGAGATGCATTTTCTCAAACAGAAGCTTGCCTGAATCACTATTATGAGGGATGTACAGCAACAGTACTTCTGGTTTGGGCTGATGACAATGAAAAGTTCTTTGCCCAATGTGCAAATGTTGGAGATTCTGCCTGTGTTATGAATGTTGATGGTAAAGAGATTAATATGACGGAAGATCACAAGATAACAAGTTATTCTGAAAGGCTACGAATTGAAGAGGCAGGCGAACCTCTGAGAGATGGGGAAACACGTCTATATGGTATAAACCTTGCGAGGATGCTTGGAGACAAATTTCTTAAACAACAGGATTGTCGTTTCAGTTCAGAGCCTTATATAAGTCAAGTTGTGCACATTGATAAGGCAAGCAGGGCTTTTGCTATACTTGCAAGCGATGGGCTATGGGATGTCATGAACGGGAAGAAAGCAATTCAGTTGGTGTTTCAGAAGAGGGATAAATACTCCACAGATGATGGTGATAATGATAATTCAGCTGAAAAGGTTGCAAATTTGTTATTGAGTGAGGCCAGAACACTGAGAACAAAGGATAACACCTCAATAATTTTCTTAGATTTTGATACATTATCCAGATTTTCTTGTAAAGCTGAGTGTTAA 1707 0.406 MAIVDGIVSLFILIMLILIIVLVFFACKPWRFLFSSRSRSSIKDDEIERPLVLDDANLVHNPISELPINYDLEGTSILNEGHFRPPRPPGLIYKQRPSAASCHMSQDVISDPSEEVAVGQTLKLSPAQLAEFQKHNRNSETDRLQDFVQRDILDQRSCLTLEVITGPSRELRCSVQSTIPSKLPLTLGRVSPSDLLIKDSEVSGKHALINWNLEKMKWELVDMGSLNGTLLNSQPINHLDPGSRQWSNPTELANGDIITLGMTTKVIVHITSQNKIHIPFGVGVASDPMSRRRGGKKLAMEDVCYYQWPLPGLDKFGLFGICDGHGGDGAARSASKVFPEIVANILSDSLKREKVVSICDASNVLRDAFSQTEACLNHYYEGCTATVLLVWADDNEKFFAQCANVGDSACVMNVDGKEINMTEDHKITSYSERLRIEEAGEPLRDGETRLYGINLARMLGDKFLKQQDCRFSSEPYISQVVHIDKASRAFAILASDGLWDVMNGKKAIQLVFQKRDKYSTDDGDNDNSAEKVANLLLSEARTLRTKDNTSIIFLDFDTLSRFSCKAEC 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02218 568 Pfam FHA domain 186 261 IPR000253 GO:0005515
Accr8g02218 568 CDD FHA_PP2C70-like 159 269 - -
Accr8g02218 568 Gene3D - 154 285 - -
Accr8g02218 568 PANTHER PROTEIN PHOSPHATASE 2C 265 552 IPR015655 GO:0004722|GO:0006470
Accr8g02218 568 ProSiteProfiles Forkhead-associated (FHA) domain profile. 185 236 IPR000253 GO:0005515
Accr8g02218 568 Pfam Protein phosphatase 2C 291 549 IPR001932 -
Accr8g02218 568 FunFam Protein phosphatase 2C 70 289 563 - -
Accr8g02218 568 SUPERFAMILY SMAD/FHA domain 158 268 IPR008984 GO:0005515
Accr8g02218 568 ProSitePatterns PPM-type phosphatase domain signature. 318 326 IPR000222 GO:0043169
Accr8g02218 568 CDD PP2Cc 280 556 IPR001932 -
Accr8g02218 568 SMART PP2C_4 275 554 IPR001932 -
Accr8g02218 568 Gene3D - 286 566 IPR036457 -
Accr8g02218 568 ProSiteProfiles PPM-type phosphatase domain profile. 281 556 IPR001932 -
Accr8g02218 568 SMART FHA_2 184 236 IPR000253 GO:0005515
Accr8g02218 568 SUPERFAMILY PP2C-like 295 557 IPR036457 -
Accr8g02218 568 FunFam Protein phosphatase 2C 70 154 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02218 Accr-Chr8 45857185 45865791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02218 1 558 PP2C-type Phosphatase Gene Family AT5G19280 58.923 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02218 K01090 - qsa:O6P43_021599 788.104