Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02188 ATGTCTTCTTCCTTAATCCTTCCCTGTATTCTTGCGCTTGTTTCATTCCTAGGCGTCTTACATGCCCAGAACAATCCTTCCCCCACATTAAATTTGAATTCCAACATCACTGCTGGATCCAATTCTTCTTTGAAATCGCCATTAGGTGATTTTGAATTTGGATTCTACCATCTTCCCGGAGATTACTATCTGGTTGGAATTTGGTTTGCAAATACCATCCCTGAGAAAACTCTGGTTTGGTACTCTAACCCACCTGTGAAAGCAAATTCTGTGATCCAGCTCTCTTCGAGAGGTCACCTAGTGCTCATATATCCCAATGGAGAAACTGAACAGATAGACAAAGGAAATGAAGTTAGTGCAAACTCAGCCTTCTTACAAGACGATGGCAATCTGGTAATGAAAGACTCCAATTCAATAGATGTCTGGCAGAGTTTTGCTCATCCCACTAACACAATGCTGCCGGGGCAAGTCTTGAACGAGGACGATGCGCTCTATTCCAAAGGTAAAGGGTCTCTGAACTACTCTAATGGAAACTTCAGGTTACTGATGCAAAGCGATGGCAACTTGGTACTTATTGCTTATCTATGGGAAGATCCTTCTTATTGGAACGCTGGCACAGGATCAACCAATAACGACGTAACCTTGGTATTCAATAATACTAGTGCTTCCTTGTATGTTGCTAAGGACTCCATCAACATACATTCTTTGACAAATAACAATCCAACCCCGACTGGAGAATTTTATCACCGAGCAACCATAGATGAAAATGGAAATTTTCATCAATGTGCTTATAATCGAATAAATAGCAGTGGGTGGATTAGGATCTGGAGTGCCATTGATGATCCTTGCAGAGTGAATGCTATTTGTGGAGTGAATAGCTTGTGTTCACCTGATAATGAATCAATCAAGTGTGAATGCCTTCCGGGTTTTATCCCGTTTAATACAACTGATGTGTCCTTATTAGGATGTCGCCCAGAAACTGTGATTAATTATTGTACACAAAACCCTTCAATGTTGAGCTTCAAGCTGGAGGTTCTTGATGATACTGATTTTCAATTTGGTTCCGAATCAGACTTTGCTGTGCTAGAACCTGCAGATTTGGAAGCATGTAAGAAATATGTCATGGATGATTGTAATGTCGTTGCTGCTACCTTCAATGCTACATCTTCAACATGTGCCAAGAAAAGGATGCCATTGGTGAATGCGAGAAAGAGTTCATCTTCTAAGGGGCAAAAAGCTCTACTTAAGGTTCCCAATGAAAACAATAATGCAACTGGAAGATTACAAGGTTCAAAAAAGAAGAGTTTTAATGTCAGAGTTTTTCTCAAGGTCATGCTCGCTGTTAGTTCCACCCTTGCTTGCTTGTTTGGAGCCCTTGCTGTCTATTACCATCCCTTGGCTCGAAAACTAATGAGAAGAAACAAGTTTCAAAATGTAAGTGTCATTGGAATCAACTTCAGAGAGTTCACATTTCAGGAGCTTCATGACGCAACAAGTGGGTTCAGTAAGACTATTGGTAAAGGATCTTCAGGCAAAGTCTACAGTGGAAATCTTGCTATTGATGATGCAAGAATTGCTATTGCAGTGAAGAAGCTGGATAAGAGATCTATTGAAAGAAGTGAACAGGAGTTCATGACTGAGCTCAAGATAATCGGTCGCACTCATCACAAAAACTTAGTAAGACTTCTGGGTTTTTGCGTTGAGAAAAGCCATAGACTCCTTGTCTACGAGTTACTTCCAAATGGAGCACTGTCCAATTTTCTATTTGGACAACGAGAAAAACCTCATTGGGCTCAGAGGATTGATATAGCTCTTGGAATTGCAAGGGGCTTACTTTACTTGCATGAAGAGTGTGAGACCCAGATTATACATTGCGACATCAAACCCCAAAATGTGCTGCTGGATGCCAATTATACAGCAAAGATTGCGGATTTTGGGCTGTCCAAGCTTCTCAACAAAGAGCAAACAAGAACTAACACTAAATTCAGAGGAACTATAGGGTACATAGCCCCTGAGTGGCTAAGGAGTGCACCCATAACTTCTAAAGTTGATGTCTTTAGCTTTGGGATTATGTTGCTTGAGATTATTTGTTGCAAAAGGCACGTCGAACAGAGTCAAGAAGCAGGTGGAGAAAGTGATGAAGATGATCCAATCCTTGCAGAATGGGTTTTGAGGTGTATAGTGTCAAAGAAATTAGAGGAATTAGCAGGTCATGATTCGGAAGTACTGGGTGATATGAAGAGGTTTGAGCAAATGGCGTTGGTTGGGTTATGGTGTATCCATCCAGATGCAGCACTGAGACCAACAATGAAGGAGGCGAATCAAATGCTTGAGGGAAACATAGTTGTTGGGGTCCCTCCTTTGCTTTATGAGCAAATGGAAGCTGACCAGAGCCTTTAG 2400 0.4129 MSSSLILPCILALVSFLGVLHAQNNPSPTLNLNSNITAGSNSSLKSPLGDFEFGFYHLPGDYYLVGIWFANTIPEKTLVWYSNPPVKANSVIQLSSRGHLVLIYPNGETEQIDKGNEVSANSAFLQDDGNLVMKDSNSIDVWQSFAHPTNTMLPGQVLNEDDALYSKGKGSLNYSNGNFRLLMQSDGNLVLIAYLWEDPSYWNAGTGSTNNDVTLVFNNTSASLYVAKDSINIHSLTNNNPTPTGEFYHRATIDENGNFHQCAYNRINSSGWIRIWSAIDDPCRVNAICGVNSLCSPDNESIKCECLPGFIPFNTTDVSLLGCRPETVINYCTQNPSMLSFKLEVLDDTDFQFGSESDFAVLEPADLEACKKYVMDDCNVVAATFNATSSTCAKKRMPLVNARKSSSSKGQKALLKVPNENNNATGRLQGSKKKSFNVRVFLKVMLAVSSTLACLFGALAVYYHPLARKLMRRNKFQNVSVIGINFREFTFQELHDATSGFSKTIGKGSSGKVYSGNLAIDDARIAIAVKKLDKRSIERSEQEFMTELKIIGRTHHKNLVRLLGFCVEKSHRLLVYELLPNGALSNFLFGQREKPHWAQRIDIALGIARGLLYLHEECETQIIHCDIKPQNVLLDANYTAKIADFGLSKLLNKEQTRTNTKFRGTIGYIAPEWLRSAPITSKVDVFSFGIMLLEIICCKRHVEQSQEAGGESDEDDPILAEWVLRCIVSKKLEELAGHDSEVLGDMKRFEQMALVGLWCIHPDAALRPTMKEANQMLEGNIVVGVPPLLYEQMEADQSL 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02188 799 SMART blect_4 29 148 IPR001480 -
Accr8g02188 799 PIRSF SRK 1 797 IPR024171 GO:0004674
Accr8g02188 799 FunFam S-receptor-like serine/threonine-protein kinase 468 578 - -
Accr8g02188 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 206 IPR036426 -
Accr8g02188 799 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Accr8g02188 799 SMART serkin_6 499 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02188 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Accr8g02188 799 CDD B_lectin 39 148 IPR001480 -
Accr8g02188 799 ProSiteProfiles Bulb-type lectin domain profile. 29 146 IPR001480 -
Accr8g02188 799 CDD EGF 282 311 - -
Accr8g02188 799 Pfam S-locus glycoprotein domain 247 312 IPR000858 GO:0048544
Accr8g02188 799 Gene3D - 148 290 - -
Accr8g02188 799 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 784 - -
Accr8g02188 799 ProSitePatterns Protein kinases ATP-binding region signature. 505 531 IPR017441 GO:0005524
Accr8g02188 799 ProSiteProfiles Protein kinase domain profile. 499 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02188 799 Gene3D Phosphorylase Kinase; domain 1 472 578 - -
Accr8g02188 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 787 - -
Accr8g02188 799 CDD STKc_IRAK 505 779 - -
Accr8g02188 799 Pfam D-mannose binding lectin 77 161 IPR001480 -
Accr8g02188 799 Gene3D - 25 147 IPR036426 -
Accr8g02188 799 SUPERFAMILY Protein kinase-like (PK-like) 475 783 IPR011009 -
Accr8g02188 799 Pfam Protein kinase domain 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02188 Accr-Chr8 45553387 45555786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02188 444 787 Receptor kinase-like Gene Family AT3G53380 39.080 4.88e-65 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g02188 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02188 - - lang:109330973 1035.02