Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02187 ATGGATGTTCATGTCCCCACTAAACTCCTCCCACTCTGTGTATCCTTTTTCGTGTATCTTTTATGCTCTAATGCTCAAACAAGCTCAAATTCTATCCAACCGGGTTCAAGCCTCGTTGCTGGCTCTAATACATCTTGGAGATCACCTTCTGCTGACTTCGCTTTTGGGTTCTATCCTCTCCTCAATGGTCACTACCTTGTAGGTATTTGGTTCAATAAGATTATTCCCAACAAAACTCTGGTCTGGTCCGCAAATCGTGATGATCCTGCTCAATTCGGATCCTCCATTAATCTCACGCAGAGTGGCCAGTTAGTGCTCCATCATGCCAATGGGTCATTGGTTTCAATCTACAATCAAACAAATAATGCTTCTTCCGCTTCAATGCAGGATAATGGAAACTTCGTCTTGAAAAACTCACTCTCAAACACCATCTGGGAGAGCTTTGCTTCACCCACAGATACCATTCTACCAGGTCAAAGATTGGGCATGGGTCAGATTCTTTACTCCAATGCCAATGGAACAATTGATTACTCGACTGGAAATTACAAGTTGGAGGTCCAATCTGATGGCAATATTGTTCTCGATGCTTTCAGGAATCCTGATGAAGCTTATTGGAACGCTATAACAATCGGCCATAAAAATGTCAGCGTAGTCTTCGACAATAATACAGCTATGCTTTACGCTGTCAACGACACTCAAACCATATCCCAAATGACACAGCAAAGCGAACTACCTTCCCCAATCGAAGGTTACTACCATCGAGCAACCATCAACGATCACGGTAACTTCGAACAGTTGATTTTTCGTAAAGAAGATGGAACAGAGTGGACGTCTATATGGAGTGCGATAACAGAGCCCTGTTTGGCGGATGGTATTTGTGGGGTGAATGGCTTTTGTACTTCACCTGACAACAAGGTGGTCATTTGTAGCTGCCTGCCTGGGTATTCACCTTTGGATCCTTATGTTCCCTCCAAAGGCTGTTATCCTAATTTGGTGATGGATTTTTGCTCTTCAGATTCATCTGCCTCGGACTTCATTGTGCAGGAAATTTATGATGTCGATATACACAACTATCATTTTGGTAATATGCAATGGATAAGTCATTCTGATTTGAATAGTTGCAAGAGAGAAGTAATGAATGATTGTTTTTGCATGGCTGCTATTTTGAACGGCACCGATTGTTTTAAGAAAAGGACACCTCTTTTGAATGGAAGAATAAGCATCCCAACCACCCGTAACAAAGTGGCGCTAGTTAAAGTTCCTGTGGTTAGCAAAAATGACTCACCTTCTTGGGTTGTTCTGCTTGTTTCATTCTTGTCTTGTTCCCTGCTCGCTCTTGTGTTTGCAGCTTCTGCTATTCATCATAACCCAAAGTTTCGCCGTTGGATGCATAAGGAGCCACCTCCCAAGCCAAAGCCAGTGGACATCAATCTCAAGACATTTTCATTCCAAGAGTTGAGGGAAGCAACAAAGGGCTTCAAGAACAAAGTTGGGCGAGGCGCATTTGGTACTGTGTATGGTGGGATCTTGACGTTGGGGGGCGAACAGGTTGAGGTTGCCGTTAAACAACTAGAAAAAGCAGAGGATCAGGATGAGATTCGTGAGAATGAGTTTGTGACAGAAGTTCAGGTCATTGGTCTGACTCATCACAGGAATCTTGTCAGGTTGGTAGGCTTCTGCAATGAACAACATCATCGTCTTCTAGTTTATGAGATGATGAAAAATGGGTCGCTCTCCGGTTTACTTTTTGGGGAAGGAGATAAACCCAAATGGGAAGATAGAGCCAGGATTGTGCTTCAAGTTGCAAGGGGTTTGCTATATCTGCATGAGGAGTGTGACCCACAGATTATCCATTGCGACATAAAGCCACAAAATGTTCTTCTTGATTCCAATTATATGGCAAAAGTTTCTGATTTTGGGGTTGCAAAGCTGCTAAAGAAAGACAAAACTAGAACCACCACCAATGTAAGAGGGACAATGGGATATCTGGCGCCAGAATGGCTCAAGAATGCACCAATCACATCAAAGGTTGATGTTTATAGCTTTGGGGTCATGTTATTGGAGACCATATTTTGTAGAAGGCACATAGAGCTGCATCAAATTGAAGATGGAGGAGAGGGTGACGACGTGATTCTAGTAGATTGGGTTGTATACTTGGTAAAAGAAGGGAATTTGAGAGTGATGGTGGATCATGATATTGAAATTTTGAATTATTTCAATAGGTTTGAGAGGATGACTATGGTTGGATTATGGTGCCTGTCTCCTAACCCAACGGTTCGGCCGTCTATGAAGAAGGTGACGCAGATGTTGGAAGGAACCATGGAGGTCGGTGTTCCTCCTCTGATTGATGCACAAATGTTTTAA 2364 0.4294 MDVHVPTKLLPLCVSFFVYLLCSNAQTSSNSIQPGSSLVAGSNTSWRSPSADFAFGFYPLLNGHYLVGIWFNKIIPNKTLVWSANRDDPAQFGSSINLTQSGQLVLHHANGSLVSIYNQTNNASSASMQDNGNFVLKNSLSNTIWESFASPTDTILPGQRLGMGQILYSNANGTIDYSTGNYKLEVQSDGNIVLDAFRNPDEAYWNAITIGHKNVSVVFDNNTAMLYAVNDTQTISQMTQQSELPSPIEGYYHRATINDHGNFEQLIFRKEDGTEWTSIWSAITEPCLADGICGVNGFCTSPDNKVVICSCLPGYSPLDPYVPSKGCYPNLVMDFCSSDSSASDFIVQEIYDVDIHNYHFGNMQWISHSDLNSCKREVMNDCFCMAAILNGTDCFKKRTPLLNGRISIPTTRNKVALVKVPVVSKNDSPSWVVLLVSFLSCSLLALVFAASAIHHNPKFRRWMHKEPPPKPKPVDINLKTFSFQELREATKGFKNKVGRGAFGTVYGGILTLGGEQVEVAVKQLEKAEDQDEIRENEFVTEVQVIGLTHHRNLVRLVGFCNEQHHRLLVYEMMKNGSLSGLLFGEGDKPKWEDRARIVLQVARGLLYLHEECDPQIIHCDIKPQNVLLDSNYMAKVSDFGVAKLLKKDKTRTTTNVRGTMGYLAPEWLKNAPITSKVDVYSFGVMLLETIFCRRHIELHQIEDGGEGDDVILVDWVVYLVKEGNLRVMVDHDIEILNYFNRFERMTMVGLWCLSPNPTVRPSMKKVTQMLEGTMEVGVPPLIDAQMF 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02187 787 Gene3D - 152 286 - -
Accr8g02187 787 Gene3D - 23 150 IPR036426 -
Accr8g02187 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 149 - -
Accr8g02187 787 ProSiteProfiles Protein kinase domain profile. 491 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02187 787 ProSitePatterns Protein kinases ATP-binding region signature. 497 522 IPR017441 GO:0005524
Accr8g02187 787 Pfam S-locus glycoprotein domain 249 317 IPR000858 GO:0048544
Accr8g02187 787 CDD B_lectin 29 151 IPR001480 -
Accr8g02187 787 Pfam Protein kinase domain 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02187 787 Pfam D-mannose binding lectin 79 164 IPR001480 -
Accr8g02187 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 778 - -
Accr8g02187 787 SUPERFAMILY Protein kinase-like (PK-like) 470 771 IPR011009 -
Accr8g02187 787 FunFam S-receptor-like serine/threonine-protein kinase 461 572 - -
Accr8g02187 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 780 - -
Accr8g02187 787 PIRSF SRK 2 786 IPR024171 GO:0004674
Accr8g02187 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Accr8g02187 787 Gene3D Transferase(Phosphotransferase) domain 1 573 777 - -
Accr8g02187 787 Gene3D Phosphorylase Kinase; domain 1 469 572 - -
Accr8g02187 787 SMART serkin_6 491 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02187 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 206 IPR036426 -
Accr8g02187 787 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Accr8g02187 787 SMART blect_4 37 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02187 Accr-Chr8 45548872 45551235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02187 478 772 Receptor kinase-like Gene Family AT1G71830 45.395 2.11e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Accr8g02187 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02187 - - aprc:113871840 959.903