Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02185 ATGGCCGAAGCTTCATACACTGTGGCATCTGACAGTGAAACCATTGGGGAGGATAAGTCATCAGCTTTTCCTGAAATTGCCATTGGAATAGACATTGGTACATCACAATGTAGTGTTGCTGTGTGGAATGGATCTGAAGTGGAGCTTTTGAAGAACACAAGAAACCAGAAGATTATGAGATCATATGTGACTTTTAAAGATGACACCCCTTCTGGAGGAGTTAGCAGTCAACTCTCTCAAGAACATGACTTGTTATCTGGAGCTACAATCTTTAACATGAAACGCTTGATTGGAAGAGTTGATACAGACCCAGTTGTCCACTCCAGTAAAAATCTCCCTTTTCTGGTACAGACCTTGGATATTGGTGTGCGTCCTTTCATTGCAGCATTAGTGAATAATATGTGGAGATCCACCACTCCGGAAGAAGTCTTGGCTATATTTCTTGTGGAACTAAGAGTAATGGCTGAAGCTCAGCTGAAACGACCAATAAGAAACGTAGTCCTCACGGTTCCAGTTTCATTCAGTCGATTCCAACTGACCCGCATAGAACGAGCTTGTGCTATGGCTGGCCTTCATGTTCTCCGGCTAATGCCTGAACCAACTGCTGTGGCTCTATTATATGGGCAGCAGCAGCAACAGAGTTCTCATGATAATATGGGCAGTGGAAGTGAGAAGATTGCTTTAATTTTCAATATGGGTGCTGGCTATTGTGATGTTGCTGTGACTGCTACAGCTGGAGGAGTATCACAAATAAAGGCCTTAGCAGGAAGTACCATCGGGGGAGAAGACTTGCTTCAGAATATGATGCATTATCTGTTACCGGAGTCTCAAACTCTATTCAAGACCCACGGTATCAAAGAAATCAAATCTATGGCCTTGCTCCGAGTTGCAACTGAAGACGCCATCCATAGGCTCTCCTCTCAAATCAGTGTGCAGATTGATTTAGACTTGGGAGATGGTTTGAAGATAAACAAGGTTATAAACCGGGACGAGTTTGAGGAAGTGAACAGAAAGGTGTTTGTGAAGTGTGAAAGCCTCATCATCCAGTGTTTGCAAGATGCCAAGGTAGAGGTTGAGGATGTAAATGATGTGATAGTCGTTGGTGGGTGCTCTTATATTCCGAAGGTCAAGAATCTTGTGGCTAGCATGTTTAATGGAAAGGAACTTTACAACGGTGTGAATCCTTTGGAAGCTGCCGTTCGTGGTGCAGCAGTTGAGGGAGCTGTAGCATCAGGCATCAATGATCCCTTTGGAAACTTAGACTTGCTAACTATCCAAGCCACACCCCTAGCTATAGGGATAAGAGCTGATGGAAACAACTTTGTCCCTGTGATACCAAGGAATACAACAATGCCAGCAAGGAGGGACTTGGTCTTCACAACCTGTCATGATAATCAAACTGAGGCTTTGATTATTGTGTATGAAGGTGAGGAAAAGAAGGCTGAAGAGAATCATTTGTTGGGATACTTCAAAGTAGTAGGAATTCCCGAAGCACCCAAAGGAGTTCCGGAGATTAATGTGTGCATGGACATAGATGCTGCAAATGTACTGAGAGTGTTAGTGGGAGTTGTAATGCCAGGGTCCCGGCAGCCGACAATTCCAATCATGGAAGTAAGGATGCCAACTGTTGACGATGGCCATGGTTGGTGCGTTGAGGCCTTAAATAGGAAGTGTGGTAATACACAAGACTTAGTTACTGTCCAGAAGAAAGTATAA 1716 0.44 MAEASYTVASDSETIGEDKSSAFPEIAIGIDIGTSQCSVAVWNGSEVELLKNTRNQKIMRSYVTFKDDTPSGGVSSQLSQEHDLLSGATIFNMKRLIGRVDTDPVVHSSKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRVMAEAQLKRPIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQQSSHDNMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMHYLLPESQTLFKTHGIKEIKSMALLRVATEDAIHRLSSQISVQIDLDLGDGLKINKVINRDEFEEVNRKVFVKCESLIIQCLQDAKVEVEDVNDVIVVGGCSYIPKVKNLVASMFNGKELYNGVNPLEAAVRGAAVEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNNFVPVIPRNTTMPARRDLVFTTCHDNQTEALIIVYEGEEKKAEENHLLGYFKVVGIPEAPKGVPEINVCMDIDAANVLRVLVGVVMPGSRQPTIPIMEVRMPTVDDGHGWCVEALNRKCGNTQDLVTVQKKV 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02185 571 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
Accr8g02185 571 FunFam Heat shock 70 kDa protein 8 91 146 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 54 66 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 393 413 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 502 518 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 26 39 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 421 440 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 166 186 - -
Accr8g02185 571 PRINTS 70kDa heat shock protein signature 361 377 - -
Accr8g02185 571 Gene3D - 212 390 - -
Accr8g02185 571 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 423 529 IPR029047 -
Accr8g02185 571 Gene3D Actin; Chain A, domain 4 261 342 - -
Accr8g02185 571 Gene3D - 91 146 - -
Accr8g02185 571 PANTHER HEAT SHOCK PROTEIN 70KDA 27 521 IPR013126 GO:0005524|GO:0140662
Accr8g02185 571 FunFam Heat shock 70 kDa protein 8 261 342 - -
Accr8g02185 571 FunFam Heat shock 70 kDa protein 8 416 531 - -
Accr8g02185 571 Pfam Hsp70 protein 27 519 IPR013126 GO:0005524|GO:0140662
Accr8g02185 571 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 418 535 IPR029047 -
Accr8g02185 571 CDD HSP70_NBD 28 408 - -
Accr8g02185 571 Gene3D - 28 408 - -
Accr8g02185 571 SUPERFAMILY Actin-like ATPase domain 224 411 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02185 Accr-Chr8 45532016 45533731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02185 27 519 Calmodulin-binding Proteins AT3G12580 39.165 8.88e-107 333