Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02157 ATGAGTACTTCAGATGAAGAATGCTCTGTTATAGGAAGCAAGGCAGATTTAGGGTTTCTAGATTTTCTGGAAAAGAAATCTGTCTATAGTTATGCTCCAAATGGAGAGGACCCTATTGTTATTTCCGTCCCATTTCCATTAGTGAATGAGGAACCACAATCAGTATGTGTTGGCCAGACTTCTGTAGATGTAATGACGATCAAGAACACCACCAATGAACCAGTGGAACTATGGAGTGTTCATATATTTGCTTCAAGTCCTGAGGACTGTTTCACACTTTCTCTGATGGAACCTCCTTCAGAAAATTCAAATGTAGATAGCGTTCAAGGTTTTCTAGAGTCTTTTTCTTTGGAGGACAGGATGCTTCAACCTAATGAGATTTTGAAAGTATGGTTATCTTGCAAAACAAAGGAATTGGGATTGCACTCCACAATTGTGTATGTTGATGCAGGGGATGAACGAATAGAAAGGAGAGTTTTTCTCTTAGCTGAAGACAAAATCTCCCAGTCTTTGGCCTCCAAAAAGCCTTTTTCAAAAGGAAGGAAGAAAGAAAAATTTGTTGTAAATACTTTTGTTGCTGGCTCACGTCCTCAGAGGAAGGGCAATCGTGCATACACAAACAGGCTTCCAACATATGACATTCCCAAGGAAATAAGAGACATGCTGGAGAGCAATCAGATCCCTGATGCTATTGAAAGAGGTCTTACAAGGAAGAATTATTCTTCTTATTTCAAAACATTAGTTATGATGGAAGAGCTACAATTGGAGGAAGACATGAGGACCTATGATATGGAATGCGTAACTTTGAGGAAAAAGAGGAATCAATTCTTGTCATTGGAGGTTCCAGGGCTAGCTGAGAGAAGGCCATCACTGGTTCATGGGGACTACATTTTTGCCAAGTTAGCCTCTGAGCATGATAATGATAACATGCCTGCTTACCAGGGTTTTGTCCACCGTGTTGAGGCTGATGAAGTACATTTGAAGTTTGATTCTCAATTTCATTTTGCCCACAACGATGGTGATCTCTACAACGTTCACTTTGCATATAATAGGCTCAATATGAGACGGTTATATCAGGCAATTGAGGCTGCAGAAAACCTAGGAAATGAATTCCTATTTCCGCATGAGACGTCTAGAAGGAGGCGCATTGAAATCTCTCATCTGGTGCCTATTTCTGGTAATATTAACGAGGAGCAGATGCTTGCGATCAAGAAGATTCTTGGATGCAAAGGTGCACCTCCTTATCTGATTCATGGTCCTCCAGGTACAGGAAAGACTAGTACAATAGTTGAAGCAGTCCTCCAACTCTACAAAAATCATAGGAAAGCTCACATTCTCGTCTGTGCACCCTCAAATAGTGCTGCAGACTACCTACTTGAGAAACTCCTTGGTCAAAAGGCTGTCAAATTTCGAGATGAGGAAATATTTAGGCTTAATGCATCTACTAGGTCCTATGAGGAAATCAAACCTGAGCTTATGCGCTTCTGCTACTTTGATGAGTGTGTCTTCAAGTGTCCCCCAGCCAATGCTCTCATGCAATTCAAGATCATAGTATCAACTTATATGAGTGTTTCTCTTCTTTACGCTGAAAATGTCTTACGAGGTCACTTTTCACACATTTTCTTGGATGAGGCTAGCCAGGCTTCAGAACCAGAAACCATGATCCCTATATCTCACCTCTGCAAAAGGGAGACCGTTGTTATTCTTGCTGGAGACCCAATGCAGTTGGGTCCGGTAATATATTCCAAGGAAGCAGAAAGCAATGGATCGGGGAAGTCATACTTGGAAAGATTGTTTGAATGTGACTTGTATTCCTATGGAGATAATAATTATATAACCAGATTGGTTAGAAACTATAGGTGTCACCCACAAATATTACATCTCCCTTCCAAGCTGTTTTATGACGGAGAATTGATTGCGTGTAAGGAGGATGATACTGGTTCTTTGTTGCTGAATGAAGACTTCCTCCCAAATAAGGAGTTCCCTGTTCTCTTCTTCGGCATCCAAGGATGTGATGAGAGAGAAGGGAGTAATCCATCATGGTTCAACCGAATTGAAGTGAGTAAGGTCATAGAGCTAGTCAAGAAGCTTACAACCGGTGGAAATATGAAGGAGGAAGACATTGGGATTATAACACCATATAGGCAACAAGTACTTAAAATAAAGCAGACACTTGAAAGTATAGATTTACCAGAGATTAAAGTTGGAAGCGTTGAGCAGTTTCAGGGACAGGAGAGACGAGTTATTATAATATCAACTGTTCGCTCAACAATCAAACATAATGACTTTGACAGAATACACTGTTTGGGATTCCTGAGCAATCATCGAAGATTCAATGTTGCTATAACCCGTGCCATATCACTGCTGATTATTATTGGGAACCCTCACATAATCTCTCAGGACTACTATTGGCACAAACTCTTGTGGCATTGTGTGGACAATTCATCTTATCTTGGTTGTTCTCTTCCCGAAAGACTGGAGATTCAGGAGGACTCTGGCTTCAAAAATTTTCAAGAAAACTCATTGCCCTCTGAAGATGTGGCATGGGGTCAAGAAGATTCACCACAATCTGATTCTGAGTTGCCTAAACCAGCTGGTACTGATGAAGCTGAATGGTCAGATGGTTGGAAGTAG 2634 0.4093 MSTSDEECSVIGSKADLGFLDFLEKKSVYSYAPNGEDPIVISVPFPLVNEEPQSVCVGQTSVDVMTIKNTTNEPVELWSVHIFASSPEDCFTLSLMEPPSENSNVDSVQGFLESFSLEDRMLQPNEILKVWLSCKTKELGLHSTIVYVDAGDERIERRVFLLAEDKISQSLASKKPFSKGRKKEKFVVNTFVAGSRPQRKGNRAYTNRLPTYDIPKEIRDMLESNQIPDAIERGLTRKNYSSYFKTLVMMEELQLEEDMRTYDMECVTLRKKRNQFLSLEVPGLAERRPSLVHGDYIFAKLASEHDNDNMPAYQGFVHRVEADEVHLKFDSQFHFAHNDGDLYNVHFAYNRLNMRRLYQAIEAAENLGNEFLFPHETSRRRRIEISHLVPISGNINEEQMLAIKKILGCKGAPPYLIHGPPGTGKTSTIVEAVLQLYKNHRKAHILVCAPSNSAADYLLEKLLGQKAVKFRDEEIFRLNASTRSYEEIKPELMRFCYFDECVFKCPPANALMQFKIIVSTYMSVSLLYAENVLRGHFSHIFLDEASQASEPETMIPISHLCKRETVVILAGDPMQLGPVIYSKEAESNGSGKSYLERLFECDLYSYGDNNYITRLVRNYRCHPQILHLPSKLFYDGELIACKEDDTGSLLLNEDFLPNKEFPVLFFGIQGCDEREGSNPSWFNRIEVSKVIELVKKLTTGGNMKEEDIGIITPYRQQVLKIKQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRIHCLGFLSNHRRFNVAITRAISLLIIIGNPHIISQDYYWHKLLWHCVDNSSYLGCSLPERLEIQEDSGFKNFQENSLPSEDVAWGQEDSPQSDSELPKPAGTDEAEWSDGWK 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02157 877 MobiDBLite consensus disorder prediction 845 861 - -
Accr8g02157 877 MobiDBLite consensus disorder prediction 845 877 - -
Accr8g02157 877 Pfam AAA domain 592 795 IPR041679 -
Accr8g02157 877 FunFam Probable RNA helicase SDE3 620 820 - -
Accr8g02157 877 FunFam Probable RNA helicase SDE3 344 489 - -
Accr8g02157 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 808 IPR027417 -
Accr8g02157 877 CDD SF1_C_Upf1 621 811 IPR047187 -
Accr8g02157 877 Gene3D - 620 824 IPR027417 -
Accr8g02157 877 CDD DEXXQc_Helz-like 396 620 IPR026122 GO:0003723|GO:0032574
Accr8g02157 877 PANTHER CANCER/TESTIS ANTIGEN 55 117 378 - -
Accr8g02157 877 Pfam AAA domain 509 583 IPR041677 GO:0004386
Accr8g02157 877 Pfam AAA domain 395 482 IPR041677 GO:0004386
Accr8g02157 877 Gene3D - 317 606 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02157 Accr-Chr8 45250206 45255340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02157 394 551 Core DNA Replication Machinery Family AT1G08840 32.919 3.07e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02157 K18422 - gmx:100801796 1287.71