Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02148 ATGGACATGGACATGGATATGGACATTCCACTTCCAGAAGAGCTGGACTTGCTGGAATCCAATGCTCGTCTTCTCGAAGACTACCCTGATCCGGAGGCACCGGAACCCTATCCATACGAAGACCAAGAAGCGCCACCAGCAGCACAACCACCATCATCTCCAGATCTTCAGTTCGACTCTGAAATCCAGGTCATCGGCCAAAAGCGATCGAGGTCGGTTAGTCCGAATGGATCACTTTCAGAGACTGCGGAGCTGTCAGAGGAGAAAAGGTGCAGGACTGACGAGTCGGCACGGGCGACTGATGAGGACTGGCTTCGTTACTCGCCACCCAAGGGTAACGAGTCTGTAGTGGTAGAGCAAGGGAGCTTTGTGAGGGAGAAGATGTTATCCAGGTATGCGTCGGAAATCGATGGAGAGTGTATGCCGATCACTGCACCCAACGGCGACAGGGTTTATGCGAGGCTAGATAGGTTGGAAGGGGAGGAACGGATGAAGAAACTGGATGTGAGAGCAAATTCTGATGGTCTTATATTAGAACCCATTAATATTCTGTTTGAGAAAATGGATCAAGAGGCTTTCACTAAGACATTGGAAGCTAGTTCTAAATGCCAAAATGTTCCGGATATTCCTGAAACACCAATTGTCCATGAGCAACTTTGGGTAGATAAATATACCCCAAATTCGTTCACTGAGCTTCTTAGTGATGAACATACAAATCGTGAGGTACTCCTGTGGTTGAAGCAATGGGACTCTAGTGTATTTGGATCTGAGATTTGCAGTACCTCAGATGAAGTTTTGTCTTCCTTGAAACGACATTCTACTGTTGTCCAAAATCAGAAACCTTTAGATTCAAAATTTCAAAGAACGATTGGAGGCCCCAAATGGAGTAACCATAGATATAGAAATTCTAAAAGTATGGATGAAAGTGGTAGTTCAAAGAGCTTTCAGGATATATTGACCAGGAAAGTAAAGCATACTGGTCCACCAGAACAGAAGATCCTTTTGCTTTGTGGTCCTCCGGGTCTTGGGAAAACTACACTTGCACATGTAGCTGCTAGACACTGTGGATATCACGTGGTGGAGGTTAATGCTAGTGATGATCGTAGTACATCGACAATTGAGTCTAAGATCCTTAACGTGGTTGAGATGAACTCTATCATGTCTGATTCAAGACCACAGTGCCTGGTGATGGATGAAATTGATGGGGCACTATCAGATGGAAAGGGTGCTGTGGAGGTTCTTTTAAAGATGGTTTCTGTTGAAAAGAAGTCTGACGCGGGAAAGGAAAATTTGGTGAAAGAGCGATCAGGAAGGAGATCTTCAAAGAAGGGACATAAGAAAGCATCACTGTCAAGACCTGTAATTTGCATTTGCAATGACCTATATGCCCCCGCCTTGAGACCATTGCGTCAGGTAGCGAAGGTTCACATTTTTGTTCAACCAACAGTTAGTCGTGTGGTAAGCAGGCTCAAATATATATGTACCAGGGAGGGAATGAAAGTTAATGCCATTGCACTTACTGCCCTAGCAGAATATACAGAATGTGATATACGATCATGCTTAAATACCCTCCAATTTCTCAACAAGAAGAAAGAAGCCGTCAATGTGTTTGATATTGGTTCTCAAGTGGTTGGCCGGAAAGACATGTCAAAGAATGTTCTGGACATTTGGAAAGAGGTTTTTCAAAGGAAAAAAGCAAAGGCAGAAAGAAAATCTCACAATAGCAAGCCTTTTGAAGTTAACTCCTTGTACTCCCTCGTATCAAGCCGTGGTGATTATGACTTGATTCTTGATGGAATTCATGAAAACATTTTACAGCTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTGAATAGTCTTGGAGTTTCTGATCTACTGCATCAATATATCATGCGTACACAACAAAATCCCCTTCTGGTTTATTTGCCACCTACAGCAATTACTGTACATCAACTGGTAGCTCAAATTCAGAAGCCAAATATCGAATGGCCAAGGTCCTACCAAAGGCATCGAACGATGATGGCAGAAAAGATGGACATTTTGAATACTTGGCACTACAAAATTCCACCATATATCGCTAGGAACTTATCAGCTAGTTCCTTTGTAGAAGACTTAATTTCTCCATTATTATATATTCTGTCCCCTCCGACTATAAAACCGGTGGCATTACAATTACTGTCTGATAAAGAGAAAAATGATCTTGCTCAATTAGTTAGCACAATGGTGTCTTACTCTGTAACATATAAAAACATGAAATCAGATATGGTGCCTAATAGCCTGAGACATGAAGTAGCGGATCACTTGACATTATCATTTGATCCCCCAATCTGTGAATTCATCAATTTTAAGGATTATACCTCAAATCATTATGTGCTTGCTCCAGCCGTCAAGCAGATTCTTGTGCATGAGGTTGAAAAGCAAAAGATCTTGCAAGTTAGTATCGATAGGCCCTTAGGAAATGGAAGTAGCAGTGAAAGGCCTGAATTCATTGAGGCTGGAACTAGCAATGCCCAATCATCCAAAATCAACCACGCAGATGCAATTTCTGTTAAAAACATTCAAAACGAAAGTAATGTAACAAAAGGAAGGAAAAATAATGCAAATGCCACCATAGTTTCACAGAATTCGCATCCTAGAAAAGGGACAGCGGACAATATGAAATTGCAAAACACAGGAAGAATGAGAATGCCGTCCAGCGGTTCCTTCTTTGACAGGTTTAGAAAGTTGAATAATAAAGGTTTTCGAAGTGATGATAGAACTGAACAGAAAGAAGCAACCTTGGACAAAGCTCTACACCCATTACTGTTCAAATTTAACGAGGGTTTTACGAACGCAGTCAAGAGGCCTGTTCGTATTCGTGAATTTCTACTGTGA 2886 0.4193 MDMDMDMDIPLPEELDLLESNARLLEDYPDPEAPEPYPYEDQEAPPAAQPPSSPDLQFDSEIQVIGQKRSRSVSPNGSLSETAELSEEKRCRTDESARATDEDWLRYSPPKGNESVVVEQGSFVREKMLSRYASEIDGECMPITAPNGDRVYARLDRLEGEERMKKLDVRANSDGLILEPINILFEKMDQEAFTKTLEASSKCQNVPDIPETPIVHEQLWVDKYTPNSFTELLSDEHTNREVLLWLKQWDSSVFGSEICSTSDEVLSSLKRHSTVVQNQKPLDSKFQRTIGGPKWSNHRYRNSKSMDESGSSKSFQDILTRKVKHTGPPEQKILLLCGPPGLGKTTLAHVAARHCGYHVVEVNASDDRSTSTIESKILNVVEMNSIMSDSRPQCLVMDEIDGALSDGKGAVEVLLKMVSVEKKSDAGKENLVKERSGRRSSKKGHKKASLSRPVICICNDLYAPALRPLRQVAKVHIFVQPTVSRVVSRLKYICTREGMKVNAIALTALAEYTECDIRSCLNTLQFLNKKKEAVNVFDIGSQVVGRKDMSKNVLDIWKEVFQRKKAKAERKSHNSKPFEVNSLYSLVSSRGDYDLILDGIHENILQLNYHDPVMQKTVKCLNSLGVSDLLHQYIMRTQQNPLLVYLPPTAITVHQLVAQIQKPNIEWPRSYQRHRTMMAEKMDILNTWHYKIPPYIARNLSASSFVEDLISPLLYILSPPTIKPVALQLLSDKEKNDLAQLVSTMVSYSVTYKNMKSDMVPNSLRHEVADHLTLSFDPPICEFINFKDYTSNHYVLAPAVKQILVHEVEKQKILQVSIDRPLGNGSSSERPEFIEAGTSNAQSSKINHADAISVKNIQNESNVTKGRKNNANATIVSQNSHPRKGTADNMKLQNTGRMRMPSSGSFFDRFRKLNNKGFRSDDRTEQKEATLDKALHPLLFKFNEGFTNAVKRPVRIREFLL 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02148 961 Pfam ATPase family associated with various cellular activities (AAA) 334 460 IPR003959 GO:0005524|GO:0016887
Accr8g02148 961 Gene3D - 217 479 IPR027417 -
Accr8g02148 961 SMART AAA_5 330 484 IPR003593 GO:0016887
Accr8g02148 961 FunFam Chromosome transmission fidelity protein 18 481 548 - -
Accr8g02148 961 MobiDBLite consensus disorder prediction 38 52 - -
Accr8g02148 961 MobiDBLite consensus disorder prediction 426 446 - -
Accr8g02148 961 MobiDBLite consensus disorder prediction 23 99 - -
Accr8g02148 961 CDD HLD_clamp_RFC 481 539 - -
Accr8g02148 961 MobiDBLite consensus disorder prediction 83 99 - -
Accr8g02148 961 Gene3D - 481 551 - -
Accr8g02148 961 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 5 961 - -
Accr8g02148 961 CDD AAA 316 481 - -
Accr8g02148 961 MobiDBLite consensus disorder prediction 53 82 - -
Accr8g02148 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 536 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02148 Accr-Chr8 45086780 45098527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02148 331 539 Core DNA Replication Machinery Family AT5G22010 29.018 5.80e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02148 K11269 - gmx:100785041 1224.92