Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02135 ATGGAGGATATGGAGATTGATCAAATTGTGGATGTTCCTGACACTCCTGATAGATTAACTACTAGGCATGTTGGTCGAAAATATGCTGGTAACCCTGATGTTTGTGTGAATGAGAAGGGAGAGAGGGTCCCCCCTGTTGCTGAAAGCAGTACGAATGGAAGTCTGGCTTTTTGTCTTCCAAAGAGTTCAAACAGTGGTGAAATGAATAACTGCATAGCTGCATCCTCATCAAATAATTCTTTTGCTTCCCGAAAGGCTCCCATATTTAGGAGGTCCCAAACTGAAAAATCTTTTAGTAAAGAGTTCGCTCACATGGCTGGATCTGAAAAGATGAAGGAAGGGAAAAATATATGCCTTAAATTTCCTTCTAAATCATCTTCCAGTGGCAATAGGGGTGTTACTGTTTTTGATTTGACTGAAGAAAATGGACAGCCCCAAAAACTCAAACCATTTTTCTCACATCATGGATTGAAGGATAATGCAACTGAAACTAAGAAAGATGGGAAAGCAAGTTTTGGGAACTCTCCTATATTTTGCATTCCTGATTCTCCAAATACATCTAGCAATGCCTTGCGAGGAAAGTGTAAAATAGATGATAAACAACATCTATGCTCAAATATAACTGTTGATCGGGGAAAGAGTATTGATCTATCTAGTGATTCTCAACAAAAAACTGAGAAGCAGGTGTCTTTGTCTCCTCACCTTATAACTGCCCCAGGATTCAGAGGCCAGAAAAGATTGGTGCGAAATGGCTGTATCTCTCCTTATAATATTGCAGCTAGAGCAAAACAATCAGCTGAACAGAATGATGTTGAACAGAGACATGCGGGGGAAGATGTTTCTAGCAATACAACGCCTCATATGAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTATGAAGGGAAAAGAATTGTTTATCCATCCTTCAAGTGGGCATGATGCCAGAACAATCAAAGCAGCTTACAGCAGCCCTATAGATAATTATGAAGAGACCAGTGGTACCAGTAATGCTATCAGAAATTCACATGAAAGCTTTGGGGGATCAGATGGTTTGACAATAACACATAACAGCACCACTACTCATTGGCCCCTGCATGATGTAACTGGGCATCGTTCAAGGAGAGGTGAAGATTCTGAAAGATTTGTGAGCGCACAATGTAGAAACAGAGTGGGTAGAAGAGACACTAGGAGCGGTCAAAACACTATGGATGTAAGATATCCTCTAGAATCTCATGCAACTTCCCTGATCATTCCTGATGCTGAAGAGTCAAGTAGACCTTGTAATACAGCAGACAAACTGACTAAAAGGCAAAGGAAAAATACGCCCACTTCTAGAAATCTTAGTCGAGAGATTATGATTCTTGATTCACCTGGGGAATCATCAAACTTAAGCTCCTCTAGAAGATCTGAAGTTATTGAGCCATTACCTGGAACAACATACACCAACAGAACATCCCATGATTCTGATGACATGAATCCTAGTGACTCGAATACTCGGGCTAGACAGGTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTGATGGGGGAGAGCATATCGATGAACATTTAGCGTGGGCATTGCAACATGAGGAGGAACTTCTGCATACATCTAGTGATACTCACCATATATCGCATGCTAGATGGTTGTCAAGGGCAGCCTCAAATAGACAGCCTCGTTCCCGGTCTCATCAAAGTCCTACAAATAGAAGGAGGGCTGTCCCTCATAACCCTCTCTCTGATAGAGTGTCACAGTTGAGTCGCTTTGTACATCGGTCTTCAACACCTGCCATCCCAACCAGAGGAAGGCGTCTTCAGTTTCCTGTGGATATGGACTTTGATATGAGACTTGATATATTGGAAGCATTGGAGGATGCAGTTGGTGATATTGGTGACATGGAAAGTGCCGAGGACATGTTTCAAGCTCATCGAGACTTCAATGAAAACGATTATGAAATGTTATTGGCCCTCGATGAGAACAATCACCAACATGCTGGTGCGTCTGTCCATCAGATCAATAGTTTGCCGCAGTCCACTATACAGAGTGATACCTGCCAAGAGGCCTGCGCCGTGTGTCTTGAAATTCCAGTTATGGGAGAAACCATTCGTCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTTCGTAGAAGGACCTCGTGCCCAGTGTGCAAGTCATCTATCACCTAA 2238 0.4218 MEDMEIDQIVDVPDTPDRLTTRHVGRKYAGNPDVCVNEKGERVPPVAESSTNGSLAFCLPKSSNSGEMNNCIAASSSNNSFASRKAPIFRRSQTEKSFSKEFAHMAGSEKMKEGKNICLKFPSKSSSSGNRGVTVFDLTEENGQPQKLKPFFSHHGLKDNATETKKDGKASFGNSPIFCIPDSPNTSSNALRGKCKIDDKQHLCSNITVDRGKSIDLSSDSQQKTEKQVSLSPHLITAPGFRGQKRLVRNGCISPYNIAARAKQSAEQNDVEQRHAGEDVSSNTTPHMSINDIVAEERSSMKGKELFIHPSSGHDARTIKAAYSSPIDNYEETSGTSNAIRNSHESFGGSDGLTITHNSTTTHWPLHDVTGHRSRRGEDSERFVSAQCRNRVGRRDTRSGQNTMDVRYPLESHATSLIIPDAEESSRPCNTADKLTKRQRKNTPTSRNLSREIMILDSPGESSNLSSSRRSEVIEPLPGTTYTNRTSHDSDDMNPSDSNTRARQVEADEILARELQEQLYHEDSFDGGEHIDEHLAWALQHEEELLHTSSDTHHISHARWLSRAASNRQPRSRSHQSPTNRRRAVPHNPLSDRVSQLSRFVHRSSTPAIPTRGRRLQFPVDMDFDMRLDILEALEDAVGDIGDMESAEDMFQAHRDFNENDYEMLLALDENNHQHAGASVHQINSLPQSTIQSDTCQEACAVCLEIPVMGETIRHLPCLHKFHKDCIDPWLRRRTSCPVCKSSIT 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02135 745 CDD RING-H2_PA-TM-RING 700 741 - -
Accr8g02135 745 Pfam Ring finger domain 699 741 IPR001841 -
Accr8g02135 745 ProSiteProfiles Zinc finger RING-type profile. 700 741 IPR001841 -
Accr8g02135 745 SMART ring_2 700 740 IPR001841 -
Accr8g02135 745 MobiDBLite consensus disorder prediction 442 489 - -
Accr8g02135 745 MobiDBLite consensus disorder prediction 557 592 - -
Accr8g02135 745 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 666 745 IPR013083 -
Accr8g02135 745 MobiDBLite consensus disorder prediction 417 503 - -
Accr8g02135 745 SUPERFAMILY RING/U-box 688 744 - -
Accr8g02135 745 PANTHER SI:CH211-59O9.10 334 745 - -
Accr8g02135 745 MobiDBLite consensus disorder prediction 360 383 - -
Accr8g02135 745 FunFam RING/U-box superfamily protein 665 745 - -
Accr8g02135 745 MobiDBLite consensus disorder prediction 264 286 - -
Accr8g02135 745 MobiDBLite consensus disorder prediction 368 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02135 Accr-Chr8 44983736 44990304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02135 498 745 C3H Transcription Factor Family AT1G04790 49.206 1.07e-65 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02135 - - aprc:113872307 709.523