Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02134 ATGGAGGATATGGAGATTGATCAAATTGTGGATGTTCCTGACACTCCTGATAGATTAACTACTAGGCATGTTGGTCGAAAATATGCTGGTAACCCTGATGTTTGTGTGAATGAGAAGGGAGAGAGGGTCCCCCCTGTTGCTGAAAGCAGTACGAATGGAAGTCTGGCTTTTTGTCTTCCAAAGAGTTCAAACAGTGGTGAAATGAATAACTGCATAGCTGCATCCTCATCAAATAATTCTTTTGCTTCCCGAAAGGCTCCCATATTTAGGAGGTCCCAAACTGAAAAATCTTTTAGTAAAGAGTTCGCTCACATGGCTGGATCTGAAAAGATGAAGGAAGGGAAAAATATATGCCTTAAATTTCCTTCTAAATCATCTTCCAGTGGCAATAGGGGTGTTACTGTTTTTGATTTGACTGAAGAAAATGGACAGCCCCAAAAACTCAAACCATTTTTCTCACATCATGGATTGAAGGATAATGCAACTGAAACTAAGAAAGATGGGAAAGCAAGTTTTGGGAACTCTCCTATATTTTGCATTCCTGATTCTCCAAATACATCTAGCAATGCCTTGCGAGGAAAGTGTAAAATAGATGATAAACAACATCTATGCTCAAATATAACTGTTGATCGGGGAAAGAGTATTGATCTATCTAGTGATTCTCAACAAAAAACTGAGAAGCAGGTGTCTTTGTCTCCTCACCTTATAACTGCCCCAGGATTCAGAGGCCAGAAAAGATTGGTGCGAAATGGCTGTATCTCTCCTTATAATATTGCAGCTAGAGCAAAACAATCAGCTGAACAGAATGATGTTGAACAGAGACATGCGGGGGAAGATGTTTCTAGCAATACAACGCCTCATATGAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTATGAAGGGAAAAGAATTGTTTATCCATCCTTCAAGTGGGCATGATGCCAGAACAATCAAAGCAGCTTACAGCCCTATAGATAATTATGAAGAGACCAGTGGTACCAGTAATGCTATCAGAAATTCACATGAAAGCTTTGGGGGATCAGATGGTTTGACAATAACACATAACAGCACCACTACTCATTGGCCCCTGCATGATGTAACTGGGCATCGTTCAAGGAGAGGTGAAGATTCTGAAAGATTTGTGAGCGCACAATGTAGAAACAGAGTGGGTAGAAGAGACACTAGGAGCGGTCAAAACACTATGGATGTAAGATATCCTCTAGAATCTCATGCAACTTCCCTGATCATTCCTGATGCTGAAGAGTCAAGTAGACCTTGTAATACAGCAGACAAACTGACTAAAAGGCAAAGGAAAAATACGCCCACTTCTAGAAATCTTAGTCGAGAGATTATGATTCTTGATTCACCTGGGGAATCATCAAACTTAAGCTCCTCTAGAAGATCTGAAGTTATTGAGCCATTACCTGGAACAACATACACCAACAGAACATCCCATGATTCTGATGACATGAATCCTAGTGACTCGAATACTCGGGCTAGACAGGTAGAAGCAGATGAGATATTGGCCCGTGAACTTCAAGAACAACTATATCATGAGGATTCTTTTGATGGGGGAGAGCATATCGATGAACATTTAGCGTGGGCATTGCAACATGAGGAGGAACTTCTGCATACATCTAGTGATACTCACCATATATCGCATGCTAGATGGTTGTCAAGGGCAGCCTCAAATAGACAGCCTCGTTCCCGGTCTCATCAAAGTCCTACAAATAGAAGGAGGGCTGTCCCTCATAACCCTCTCTCTGATAGAGTGTCACAGTTGAGTCGCTTTGTACATCGGTCTTCAACACCTGCCATCCCAACCAGAGGAAGGCGTCTTCAGTTTCCTGTGGATATGGACTTTGATATGAGACTTGATATATTGGAAGCATTGGAGGATGCAGTTGGTGATATTGGTGACATGGAAAGTGCCGAGGACATGTTTCAAGCTCATCGAGACTTCAATGAAAACGATTATGAAATGTTATTGGCCCTCGATGAGAACAATCACCAACATGCTGGTGCGTCTGTCCATCAGATCAATAGTTTGCCGCAGTCCACTATACAGAGTGATACCTGCCAAGAGGCCTGCGCCGTGTGTCTTGAAATTCCAGTTATGGGAGAAACCATTCGTCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTTCGTAGAAGGACCTCGTGCCCAGTGTGCAAGTCATCTATCACCTAA 2235 0.4215 MEDMEIDQIVDVPDTPDRLTTRHVGRKYAGNPDVCVNEKGERVPPVAESSTNGSLAFCLPKSSNSGEMNNCIAASSSNNSFASRKAPIFRRSQTEKSFSKEFAHMAGSEKMKEGKNICLKFPSKSSSSGNRGVTVFDLTEENGQPQKLKPFFSHHGLKDNATETKKDGKASFGNSPIFCIPDSPNTSSNALRGKCKIDDKQHLCSNITVDRGKSIDLSSDSQQKTEKQVSLSPHLITAPGFRGQKRLVRNGCISPYNIAARAKQSAEQNDVEQRHAGEDVSSNTTPHMSINDIVAEERSSMKGKELFIHPSSGHDARTIKAAYSPIDNYEETSGTSNAIRNSHESFGGSDGLTITHNSTTTHWPLHDVTGHRSRRGEDSERFVSAQCRNRVGRRDTRSGQNTMDVRYPLESHATSLIIPDAEESSRPCNTADKLTKRQRKNTPTSRNLSREIMILDSPGESSNLSSSRRSEVIEPLPGTTYTNRTSHDSDDMNPSDSNTRARQVEADEILARELQEQLYHEDSFDGGEHIDEHLAWALQHEEELLHTSSDTHHISHARWLSRAASNRQPRSRSHQSPTNRRRAVPHNPLSDRVSQLSRFVHRSSTPAIPTRGRRLQFPVDMDFDMRLDILEALEDAVGDIGDMESAEDMFQAHRDFNENDYEMLLALDENNHQHAGASVHQINSLPQSTIQSDTCQEACAVCLEIPVMGETIRHLPCLHKFHKDCIDPWLRRRTSCPVCKSSIT 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02134 744 MobiDBLite consensus disorder prediction 441 488 - -
Accr8g02134 744 MobiDBLite consensus disorder prediction 416 502 - -
Accr8g02134 744 SMART ring_2 699 739 IPR001841 -
Accr8g02134 744 Pfam Ring finger domain 698 740 IPR001841 -
Accr8g02134 744 SUPERFAMILY RING/U-box 687 743 - -
Accr8g02134 744 MobiDBLite consensus disorder prediction 359 382 - -
Accr8g02134 744 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 665 744 IPR013083 -
Accr8g02134 744 ProSiteProfiles Zinc finger RING-type profile. 699 740 IPR001841 -
Accr8g02134 744 PANTHER SI:CH211-59O9.10 345 744 - -
Accr8g02134 744 MobiDBLite consensus disorder prediction 556 591 - -
Accr8g02134 744 MobiDBLite consensus disorder prediction 367 382 - -
Accr8g02134 744 FunFam RING/U-box superfamily protein 664 744 - -
Accr8g02134 744 CDD RING-H2_PA-TM-RING 699 740 - -
Accr8g02134 744 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02134 Accr-Chr8 44983736 44990304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02134 497 744 C3H Transcription Factor Family AT1G04790 49.206 9.57e-66 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02134 - - aprc:113872307 710.679