Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02120 ATGAGGCAAATCTTTGTGCTTTTCTTCTCTGTCACCACCACTCTCTTATGTTGTTGTACCCTTGCTTTCTCTTACAACCATGAAGCTTATCTGCTTTATTCATGGCTTCACAGCTCACCCTCTTCACCACCCTCTTCACATTTCTCTAACTGGAACATTAGTGACTCAAACCCATGTAACTGGGCCTCCATAACTTGTTCTCCTCAAGGTTTTGTCACAGAAATTAATCTTGTCTCTGTCCCTCTTCACTTGCCTCTACCTTACAATCTCTCTTCCTTTCGCTTCCTTACCAAACTTGTCATGTCAGATGCAAATCTCTCCGGAAGTATCACTTCTGATATTGGTGCTTGTTCTTCCCTTACTGTCATTGATCTTAGCCATAATAGTCTCACTGGTTCTATTCCTACGAGTGTTGGGAATTTTCCAAATCTCAAGACTTTGGCCTTAAACTCCAACTTCCTCAGTGGAGAAATCCCAAATGAGCTAAGTAATTGCATTGGCCTAGAATCTATCATCCTTTCAAATAATCAGCTCAGTGGAAAAATCCCACCTTTGCTGGGAAAGTTATCAAAACTTGAGATTTTTAGAGCAGGAAGGAACAGACTCATTACTGGGAATATACCACATGAGCTGGGAAATTGCACTAATTTGGTTTCTTTGGGGTTGACTGAAACCAGCATATCAGGCTCTTTGCCTGCTTCATTGGGTAGGCTTAGAAAGCTTCAAAGGTTGTCACTTTGTGATACTATGCTTTCTGGTGAGATTCCATCAGAGATAGGTAATTGCTCTGAGCTTGTTGAGTTGAGGCTATGCACAAATAAACTATCAGGTTCTGTTCCATCTGATTTAGGGAAGCTGAAAAAGCTGCAAATTTTGAATTTATGGGATAATTTTATTACTGGGGCCATTCCTGAAGAGATTGGTAACTGTACAAGCTTGACAACACTTGAGCTTTCTATGAATTCTCTGTCTGGGACTATCCCTTTGTCTGTAGGTAAGCTTGTAAAGCTTGAAAAGTTTTTGGTTGCTCAAAACAATATCTCTGGTTTTATACCTTCAACTCTTTCAAATGCCTCAAACCTGCAAAGATTGGAACTTTACATGAACCAAATCTCAGGGTTGATCCCACCTGAGCTTGGGAGATTGCAAAAGCTCACTCATTTCTATGCTTGGGGCAACCAGCTTGAAGGAACCATACCTTCTACTTTAGCCAACCTCAGTAACCTCCAAAAGCTTGATTTGTCTTGGAACTCATTTATTGGAAGCATTCCAAAAGGCCTGTTTTTGCTACAAAACCTCACGGAGTTTGAGTTAATTTTCACTGATATGTCAGGTGCAATTCCACCTGAGATAGGAAGTTGCAGCTCTCTTGAAAGGCTGAGTCTCAGAAACAATAGAATTTATGGTGAGATTCCAAAGACAATTGGTGGTTTAAAAAACTTAATCTATTGTGATTTCTCCGATAACCGCCTTTACGGGTCATTGCCGGAGGAGATTGGTGGTTGTTCAGGGCTGGAAATGATAAACCTTAGCAACAATGACTTAGAAGGTCCACTTCCTGAGTCATTATCAACACTGCCCAATCTTTCAGTTTTGAATGCATCTAACAATAAATTTGAAGGTCAAATACCTACAAGCTTAGGTCATGATCTTTCTTCCCTAATTGATCTCCTACTTAGCAGAAACAAGTTCTCTGGAACCATTCCTCAATCACTTGGTCTATGTTCAAAGCTCCAAATGCTTGATCTTAGTAGCAATGAACTCACTGGGAGCATACCAAAAGAGTTAGGTGATATAAAAACTCTTGCAGTTGTTCTTAACCTTAGTCACAACGCTCTTAAAGGACCAATTCCTTCTGAAATCTCTAAACTAAACATGCTCTCAGTGATTGACATTTCACATAACAATTTGGAAGGAAATTTGCAGCCTCTTTCTCACCTTGCGAGTCTTGTTTCTCTCGATATCTCTTACAATAACTTCACTGGCCATTTTCCCGACACTAGGATTTTTAGACACCTATCAGCACAAGAAATTATGGGAAACAGGGGTCTCTGTTCTAGGATTCAGGATTCTTGCTTCTTAAATGGTTCACGCAGGAGACGATTGACTGAAAACATAAACTCAACCATTCTTAAACTGGTCATTGTGGTGCTGGTACTGTTGATAATGATATTTGTTGTTACAATAATCATTTCAGTTAACAGGGCAAGAACTAAGAGAGATAATAATAATCATTCAGAGATGGGAAACACATGGACATGGCAATTCACTCCATTTCAGAGGTTAAATTTCTCAGTTGAGCAGGTGCTTAGAAGCTTAGAAGACGAAAACATAATAGGAAAAGGAAGCTCAGGAGTTGTTCATCGTGTCGATATTGGTAATAATGAAGCCATAGCCGTGAAGAAATTGTGGCCAGCTCCAATGGCTTCTAGTGTTATTGGAGGAGCAAATGACGACGAGAGAGGAGAACGCAACTCTTTCTCGAGAGAGCTGAAAATCCTCGGCTTAATCCGACATAGGAACATTGTGAGACTTCTAGGATGTTGTTGGAGTGAAAACATGAGATTGCTTATGTATGAATACATGCCAAATGGGAGCTTAGGAAGTCTTCTTCATGAGAGGGATGAGAATTCTTGTTTGGAATGGGAAGTCAGGTACAAAATCTTGTTAGGTGCTGCACAAGGCCTTGAATATCTTCACCATGATAGTGAACCTGCAATAGTCCACAGAGACATCAAACCTAGTAACATCCTTATTGGTCCTGAATTTGATGCTTGCGTTGCTGATTTTGGCTTGGCCAAGTTTGTTGACGATTGTGGTTTCGGCAAGTCATCATCCAATATGGTTGCTGGTTCTTGGGGATATATAGCTCCTGAGTATGGCTACATGATGAAGATCACAGAGAAGAGTGATGTTTATAGTTTTGGAGTAGTGATGCTGGAAGTGCTAACGGGTAAGAAACCGATTGATCCAAGCATACAAGAAGGGTTACACATTGCAGAATGGGTGAGAGAAAAGAGGGGACAAGTATCAGAAGTCCTAGACCCAGCATTACAAGGTGCAGCAGAATCAGAAATAGAAGAAATGAAGGAAGCAATAGGGATTGCCCTGTTGTGCTTAAGTTATGCCCCAAATCAAAGACCTACAATGAGGGATGTGGCAAGCATGATCAAGGAAATTAAACAAGTAAGTGAGGCTGAATATGCAGATTTTGATACCCTCTTAAAGGACTCTCCTTCACCACTTACTGGGGCTTCTGCTGCACAATCTTCAAATAATTCACCTGCAACACCAAGCTTGTACCTTAAAAGCAACAAACCTAGCCCCTCCGCATCCTCTCCATGA 3345 0.4075 MRQIFVLFFSVTTTLLCCCTLAFSYNHEAYLLYSWLHSSPSSPPSSHFSNWNISDSNPCNWASITCSPQGFVTEINLVSVPLHLPLPYNLSSFRFLTKLVMSDANLSGSITSDIGACSSLTVIDLSHNSLTGSIPTSVGNFPNLKTLALNSNFLSGEIPNELSNCIGLESIILSNNQLSGKIPPLLGKLSKLEIFRAGRNRLITGNIPHELGNCTNLVSLGLTETSISGSLPASLGRLRKLQRLSLCDTMLSGEIPSEIGNCSELVELRLCTNKLSGSVPSDLGKLKKLQILNLWDNFITGAIPEEIGNCTSLTTLELSMNSLSGTIPLSVGKLVKLEKFLVAQNNISGFIPSTLSNASNLQRLELYMNQISGLIPPELGRLQKLTHFYAWGNQLEGTIPSTLANLSNLQKLDLSWNSFIGSIPKGLFLLQNLTEFELIFTDMSGAIPPEIGSCSSLERLSLRNNRIYGEIPKTIGGLKNLIYCDFSDNRLYGSLPEEIGGCSGLEMINLSNNDLEGPLPESLSTLPNLSVLNASNNKFEGQIPTSLGHDLSSLIDLLLSRNKFSGTIPQSLGLCSKLQMLDLSSNELTGSIPKELGDIKTLAVVLNLSHNALKGPIPSEISKLNMLSVIDISHNNLEGNLQPLSHLASLVSLDISYNNFTGHFPDTRIFRHLSAQEIMGNRGLCSRIQDSCFLNGSRRRRLTENINSTILKLVIVVLVLLIMIFVVTIIISVNRARTKRDNNNHSEMGNTWTWQFTPFQRLNFSVEQVLRSLEDENIIGKGSSGVVHRVDIGNNEAIAVKKLWPAPMASSVIGGANDDERGERNSFSRELKILGLIRHRNIVRLLGCCWSENMRLLMYEYMPNGSLGSLLHERDENSCLEWEVRYKILLGAAQGLEYLHHDSEPAIVHRDIKPSNILIGPEFDACVADFGLAKFVDDCGFGKSSSNMVAGSWGYIAPEYGYMMKITEKSDVYSFGVVMLEVLTGKKPIDPSIQEGLHIAEWVREKRGQVSEVLDPALQGAAESEIEEMKEAIGIALLCLSYAPNQRPTMRDVASMIKEIKQVSEAEYADFDTLLKDSPSPLTGASAAQSSNNSPATPSLYLKSNKPSPSASSP 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02120 1114 Gene3D Transferase(Phosphotransferase) domain 1 862 1076 - -
Accr8g02120 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 605 690 - -
Accr8g02120 1114 Gene3D Phosphorylase Kinase; domain 1 749 861 - -
Accr8g02120 1114 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Accr8g02120 1114 Pfam Leucine rich repeat 456 515 IPR001611 GO:0005515
Accr8g02120 1114 Gene3D Ribonuclease Inhibitor 280 377 IPR032675 -
Accr8g02120 1114 MobiDBLite consensus disorder prediction 1079 1114 - -
Accr8g02120 1114 Pfam Leucine Rich Repeat 408 426 IPR001611 GO:0005515
Accr8g02120 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 425 519 - -
Accr8g02120 1114 ProSiteProfiles Protein kinase domain profile. 773 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02120 1114 FunFam Nuclear pore complex protein NUP107 25 173 - -
Accr8g02120 1114 Gene3D Ribonuclease Inhibitor 405 693 IPR032675 -
Accr8g02120 1114 FunFam LRR receptor-like serine/threonine-protein kinase 528 600 - -
Accr8g02120 1114 Pfam Protein kinase domain 774 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02120 1114 SUPERFAMILY Protein kinase-like (PK-like) 746 1057 IPR011009 -
Accr8g02120 1114 SMART LRR_typ_2 526 550 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 334 357 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 647 672 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 141 165 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 551 575 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 238 262 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 286 310 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 406 430 IPR003591 -
Accr8g02120 1114 SMART LRR_typ_2 454 478 IPR003591 -
Accr8g02120 1114 Pfam Leucine rich repeat N-terminal domain 38 67 IPR013210 -
Accr8g02120 1114 ProSiteProfiles Leucine-rich repeat profile. 408 430 IPR001611 GO:0005515
Accr8g02120 1114 SMART serkin_6 773 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02120 1114 ProSitePatterns Protein kinases ATP-binding region signature. 779 802 IPR017441 GO:0005524
Accr8g02120 1114 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
Accr8g02120 1114 SUPERFAMILY RNI-like 244 607 - -
Accr8g02120 1114 Gene3D Ribonuclease Inhibitor 182 279 IPR032675 -
Accr8g02120 1114 SUPERFAMILY RNI-like 73 328 - -
Accr8g02120 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 862 1075 - -
Accr8g02120 1114 PANTHER UNNAMED PRODUCT 293 992 - -
Accr8g02120 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672|GO:0006468
Accr8g02120 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 201 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02120 Accr-Chr8 44859154 44863046 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02120 23 1082 Receptor kinase-like Gene Family AT5G56040 44.383 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr8g02120 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02120 - - pvy:116108224 1259.2