Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02119 ATGCTTCTGGACAAGAATGCCCAAAAAGAAACCCTTTATGATGTTCTTAATGTGAAGGAAGATGCAAGCTACGAAGAGATTCGTGCCAGTTACCGCAGTGCTATACTCAATTTACATCCTGATAAATTATTGAAGACATCTGATCAGATGTCAAGCACTCATCAAACTTCAGGAGACAGATTCCTCACTGTACAGGAGGCATGGGAAATTCTCAGCAATTCAGCCTCTCGTTCAGTATACGACAATGAGCTGCGTGGTTCAAGGCAGGATGCATTGGCTGCAGATGTTGTAGAAGATGTAAGCTTGCAGGATATGATCGTTGAAGAAGCAATGTATCTCTCTTACCAGTGCAGGTGTGGTGATTACTTCTCCATAGACTCTACAGAATTGGAGAAAATGGGGTATTCATTGTTAAGGGATGGTAGTGAGATTTCTTTACGTACTGTTGATAGTTTGCCAGCTTCTGTTATTCTTCCGTGTGGATCTTGTTCTCTGAAAGTTCGTCTACTAATCAACATTGATGGTAGCAATTGA 534 0.4139 MLLDKNAQKETLYDVLNVKEDASYEEIRASYRSAILNLHPDKLLKTSDQMSSTHQTSGDRFLTVQEAWEILSNSASRSVYDNELRGSRQDALAADVVEDVSLQDMIVEEAMYLSYQCRCGDYFSIDSTELEKMGYSLLRDGSEISLRTVDSLPASVILPCGSCSLKVRLLINIDGSN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02119 177 SUPERFAMILY CSL zinc finger 97 174 IPR036671 -
Accr8g02119 177 CDD DnaJ 11 73 IPR001623 -
Accr8g02119 177 SUPERFAMILY Chaperone J-domain 9 85 IPR036869 -
Accr8g02119 177 Pfam DnaJ domain 12 81 IPR001623 -
Accr8g02119 177 Pfam CSL zinc finger 99 170 IPR007872 -
Accr8g02119 177 Gene3D DPH Zinc finger 89 176 IPR036671 -
Accr8g02119 177 PRINTS DnaJ domain signature 56 76 IPR001623 -
Accr8g02119 177 PRINTS DnaJ domain signature 13 31 IPR001623 -
Accr8g02119 177 PRINTS DnaJ domain signature 31 46 IPR001623 -
Accr8g02119 177 Gene3D DnaJ domain 2 88 IPR036869 -
Accr8g02119 177 ProSiteProfiles dnaJ domain profile. 11 84 IPR001623 -
Accr8g02119 177 FunFam DNAJ heat shock N-terminal domain-containing protein-like 89 175 - -
Accr8g02119 177 PANTHER DPH3 HOMOLOG-RELATED 11 172 IPR044248 GO:0017183|GO:0046872
Accr8g02119 177 SMART dnaj_3 10 76 IPR001623 -
Accr8g02119 177 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 96 172 IPR007872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02119 Accr-Chr8 44828378 44828911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02119 7 81 C2H2 Transcription Factor Family AT1G74250 37.333 1.80e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02119 K17867 - gmx:100814856 254.988