Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g02116 ATGTCTGGGAATTTCAATAAAAGGAGAGCGTTGGAAGACAGGTGTTCTGGTATTCTCCTATTATTCACTTTACTTCTTTATACTACAGAGGGATTGAACACAGAGGGGCAATATCTGCTCGAGCTGAAGAGTAGTCTTCATGATGAATCCAATCACTTGGCAAATTGGAAGTCAGCTGATGAAACGCCTTGTGGATGGACGGGTGTAAATTGCACTTATGACTATAATCCAGTGGTCTGGTGCCTTGATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATCCTAGCATTGGAGGTCTCACACATCTAACTTATCTCAATCTTTCCTACAATGGGCTGATGGGAAATATACCCAATGAAATTGGAAATTGCTCGAGCTTGGAATTTCTTTTTTTGAACAATAATCGATTCAGTGGACAAATTCCTGCTGAATTGGGAAAGCTGTCCCTTTTGAGAAGTTTGAATATTTGCAACAACTTGCTCTCTGGTTCTCTGCCGGAGGAACTGGGAAACTTGTCTTCATTAGTTGAGCTTGTAGTCTTCACAAACAATTTCACCGGTCCCCTGCCTCATTCTATTGGAAATCTAAGGAATCTCACGACTTTGAGAGCTGGTGGAAATGGATTGTCCGGTAGCTTGCCAAGTGAGATCGGTGGGTGTACGAGCATGGAGCTTCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTACCAACAGAGATTGGGATGCTTCAGAACTTAAGAGAACTTGTTTTATGGAATAATCAATTATCAGGGCTTATTCCTAAAGAGATTGGGAATTGTACCAGCCTTGAAACTCTTGCTTTATATGGAAATGCTCTTGTTGGATCTATACCTGAGGAGATTGGGAATCTCAAATCTCTGGGGAGGTTGTACCTTTACAGAAATAAGTTGAATGGAACAATTCCAAGGACAATTGGGAATCTTTCTCTGGCATTAGAAATTGATTTCTCAGAAAACTCTTTGATGGGTGATATTCCTTCTGAGATCAGCAAAATAAGTGGTCTCCAGTTGCTCTTTCTTTTTGAGAACCAACTATCAGGTGTTATACCCTATGAGTTTTGTAGCTTGAGGAACCTGACAAGGCTGGACCTATCCATTAATAATCTCACAGGTTCAGTTCCATTGGGGTTCCAGTACTTGACTCGAATGACTCAGTTGCAACTTAATGACAACTCTCTAAGTGGAAATATTCCTGAAAGCCTTGGATTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAATGAATTGACTGGAACAATACCTCCCCATCTATGTCGAAATTCTAATTTGATGTTGTTGAATCTGGCTTCTAATCGGCTGTATGGAAATATACCAACAGGCATCCTGAACTGTAAAACATTGGCACTTTTACTATTGGTTGAGAATAATCTTACTGGTGGCTTTCCTTCACAACTGTGCCAACTAGTGAACCTTACTGCCATTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCAGAGATTGGGTGGTGCCACAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTAAAGAAATAGGAAACCTTTCTCAGTTAGTGACCTTCAATGTGTCGTCTAATTCTTTCACTGGACCAATCCCACGTGAAATTGTTAGATGCAAGAAGCTTCAGCGAATTGATCTCAGCCGCAACAGCTTTACTGGTTCCCTACCAGATGAGCTTGGAACACTCTCGCAGTTGGAGATTCTCAAGGTCTCAGATAATAAACTTACTGGGCATATTCCTCCAACATTAGGTAATCTGCTTCGTTTGACTGCATTGCAGATGGGTGGCAATTTACTTTCTGGGGAAATACCTCCTGATCTGGGTAATCTCACAAGCTTACAGATTGCATTGAATCTCAGTTACAATAACCTTGCTGGAAGTATACCTGATAAGCTTGGCAATCTCTATATGCTTGAGTTTCTCCTCCTCAATAATAATAATCTGAGTGGTGAAATTCCCAGCACATTTGAAAACCTTTCAAGCTTGATGGGGTGTAATTTCTCATACAACAATCTTTCTGGACCTATACCTTCCATTCCACTATTTGAAAATATGGCAATTAGCAGCTTTATTGGCGACAATGGCCTTTGTGGTGCTCCTTTGCTTGGCTGCGACACTAATCCATCTTCTCTATCTGGTCCTCCTATGAATAATGTTAATTCTTCTCGCACCAAGATCATCACTATTATTGCAACAGTCATTGGCGGCATTTCTCTCATTCTAATAGTATTCATTATATATTTAATGAGACGTCCTCCTGAGCCTGTTTCCTCATTGAGGGATTCTGAGATTCCCTCCTCAGATTCAGATATCTATTTGCCTCCAAAAGATGGCTTCACCTTCCATGATCTACTTGAAGCTACCAACAACTTTCATGACAGTTATGTTATTGGAAGAGGGGCTTGTGGAACAGTTTATAAGGCGGTGATGCCATCTGGGAAGACCATTGCTGTTAAATTGTTGGCATCCAACAGGGAAGGGAACAACATTGAGAATAGCTTCCAGGCTGAGATATTAACTCTTGGAAAGATAAGGCATCGAAATATAGTGAAGTTGTATGGATTTTGCTATCACCAAGGTAGCAATCTGCTACTGTATGAGTTCATGGCAAGGGGTAGCCTAGGGGAGCTACTTCATGGATTTGCAAGTAATTTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCAGAGGGTCTTGCTTACTTGCATCATGACTGTAAACCAAAGATCATTCACCGTGATATAAAATCAAACAACATTTTACTTGATGAAAACTTTGAGGCTCATGTGGGTGACTTTGGTTTGGCAAAAATCATTGACATGCCTCAATCAAAGTCAATGTCAGCAGTTGCTGGGTCATATGGTTATATTGCTCCTGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGACATCTATAGCTATGGAGTTGTGCTGTTGGAGTTGCTAACTGGAAGAACTCCGGTTCAGCCGCTAGAGCAAGGAGGCGATCTGGTGACATGGGTCAAGAACTATATCCGGAGCCATAACAACACACTGTCCGCTGGTGTGCTTGACAATCGTCTCAATCTCCAAGATCAAACCACTGTGAACCACATGCTCACTGTCCTCAAAATTGCTTTGCTCTGCACAAACATGACCCCTACGGATCGCCCATCGATGCGCCAAGTCGTGTTGATGCTCAAAGAATCCAACGAGCGAGAAGGAAACTTGGCCAATATTTCTCCATCTCGGTATGAGGATCCCACTTCCAACGATGAGCAAAAGCGTACATGA 3339 0.4184 MSGNFNKRRALEDRCSGILLLFTLLLYTTEGLNTEGQYLLELKSSLHDESNHLANWKSADETPCGWTGVNCTYDYNPVVWCLDLSSMNLSGTLNPSIGGLTHLTYLNLSYNGLMGNIPNEIGNCSSLEFLFLNNNRFSGQIPAELGKLSLLRSLNICNNLLSGSLPEELGNLSSLVELVVFTNNFTGPLPHSIGNLRNLTTLRAGGNGLSGSLPSEIGGCTSMELLGLAQNQIGGELPTEIGMLQNLRELVLWNNQLSGLIPKEIGNCTSLETLALYGNALVGSIPEEIGNLKSLGRLYLYRNKLNGTIPRTIGNLSLALEIDFSENSLMGDIPSEISKISGLQLLFLFENQLSGVIPYEFCSLRNLTRLDLSINNLTGSVPLGFQYLTRMTQLQLNDNSLSGNIPESLGFYSPLWVVDFSDNELTGTIPPHLCRNSNLMLLNLASNRLYGNIPTGILNCKTLALLLLVENNLTGGFPSQLCQLVNLTAIELNQNRFSGPISPEIGWCHKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFTGPIPREIVRCKKLQRIDLSRNSFTGSLPDELGTLSQLEILKVSDNKLTGHIPPTLGNLLRLTALQMGGNLLSGEIPPDLGNLTSLQIALNLSYNNLAGSIPDKLGNLYMLEFLLLNNNNLSGEIPSTFENLSSLMGCNFSYNNLSGPIPSIPLFENMAISSFIGDNGLCGAPLLGCDTNPSSLSGPPMNNVNSSRTKIITIIATVIGGISLILIVFIIYLMRRPPEPVSSLRDSEIPSSDSDIYLPPKDGFTFHDLLEATNNFHDSYVIGRGACGTVYKAVMPSGKTIAVKLLASNREGNNIENSFQAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEFMARGSLGELLHGFASNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKIIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVKNYIRSHNNTLSAGVLDNRLNLQDQTTVNHMLTVLKIALLCTNMTPTDRPSMRQVVLMLKESNEREGNLANISPSRYEDPTSNDEQKRT 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g02116 1112 Gene3D Transferase(Phosphotransferase) domain 1 887 1100 - -
Accr8g02116 1112 FunFam Leucine-rich repeat receptor protein kinase MSP1 773 886 - -
Accr8g02116 1112 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Accr8g02116 1112 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 191 281 - -
Accr8g02116 1112 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 190 - -
Accr8g02116 1112 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 412 726 - -
Accr8g02116 1112 Gene3D Ribonuclease Inhibitor 185 278 IPR032675 -
Accr8g02116 1112 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Accr8g02116 1112 SUPERFAMILY L domain-like 34 331 - -
Accr8g02116 1112 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 284 388 - -
Accr8g02116 1112 SUPERFAMILY Protein kinase-like (PK-like) 784 1082 IPR011009 -
Accr8g02116 1112 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 887 1098 - -
Accr8g02116 1112 Pfam Protein kinase domain 810 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02116 1112 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 336 1084 - -
Accr8g02116 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Accr8g02116 1112 Gene3D Phosphorylase Kinase; domain 1 777 886 - -
Accr8g02116 1112 SMART LRR_typ_2 388 412 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 196 220 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 580 604 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 148 172 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 532 556 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 364 387 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 653 676 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 244 268 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 484 508 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 100 124 IPR003591 -
Accr8g02116 1112 SMART LRR_typ_2 292 316 IPR003591 -
Accr8g02116 1112 SMART serkin_6 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02116 1112 SUPERFAMILY L domain-like 385 712 - -
Accr8g02116 1112 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Accr8g02116 1112 Gene3D Ribonuclease Inhibitor 279 386 IPR032675 -
Accr8g02116 1112 ProSiteProfiles Protein kinase domain profile. 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g02116 1112 Gene3D Ribonuclease Inhibitor 387 726 IPR032675 -
Accr8g02116 1112 MobiDBLite consensus disorder prediction 1089 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g02116 Accr-Chr8 44791853 44796006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g02116 54 1084 Receptor kinase-like Gene Family AT1G73080 37.672 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr8g02116 Pkinase 9.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g02116 - - qsa:O6P43_003073 1641.32